Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00679 ATGTCAGGGTGGGATGAGGGAGCCGTCTACTACAGCGACCAAGCTCACTCATGGGATGACGGCACCGGCCGTGGTGGAGACACCGAAGGCACCCTATCCAACCACACCATCCTCCAGAAATTCAAGGAGTTCATCCGAAACTTTGAGACTGAGAAGAATGTATTCCCTTACAGAGAAAGCCTTGTACATAATCCCAAGCATCTTCTCATAGACATGGAAGATCTTGACGCCTTCGATGCCGATTTACCCTCAAAACTCCGCTCTGCTCCCGCCGACTACTTGCCCCTGTTTGAGATGGCGGCAGCGCAGGTTTTGGTGAGTTTGAAGGCCAAAGTTGCTGGGGATACTGGAGTTATGGAGGATCAGGTAATCGGAGATGTTCAGATTTTGCTCACTTCCAAGGAGGATCCAGTGTCGATGAGGTACCTCGGGGCTCAATATGTATCAAAGCTCGTTAAAATAGCTGGGATTACAATTGCTGCTTCAAGGACTAAGGCAAAAGCAACTTATGTCACCCTAATATGTAAGAACTGCAAAAAGGGGAAGCAAGTACCATGCCGTCCAGGACTTGGCGGGGCTGTGGTCCCTCGTTCATGTGATCATGTTCCTCAGGCAGGGGAAGAACCATGCCCAATTGATCCATGGATTGTCGTTCCTGATAAAAGCAAGTATGTTGATCAACAAACCTTGAAACTACAAGAAAACCCCGAGAATGTTCCAACTGGGGAGCTTCCTAGAAACATGCTTCTCTCTGTTGATCGCCATCTTGTTCAAAGAGTAGTACCTGGCTCAAGATTGACAGTCATAGGAATCTATAGCATCTATCAAGCTTCTAATTCTTCTACGTCCCACAAAGGAGCAGTAGCAATTAGGCAGCCTTATATCAGGGTCGTAGGAATAGAAGAAGCAAATGAGGCTAAGTCTGGAGGTCCAGCTGCATTTACACCTGAGGAGATAGAAGAATTCAAGAAATTTGCTACTGAACCTGATGCTTACAAAAATATATGCTCTAAGATAGCTCCCTCTATATTTGGTCACGATGACGTTAAAAGGGCGGTGGCTTGTCTTTTGTTTGGAGGATCAAGAAAGAATTTGCCAGATGGAGTGAAGTTAAGAGGTGATATCAATGTGTTGCTTCTTGGAGATCCATCTACTGCAAAGTCACAGTTTCTCAAATTTGTTGAAAAGACAGCTCCGGTTGCTGTTTATACTTCAGGAAAAGGCTCATCAGCTGCTGGTCTTACAGCTTCTGTAATCCGAGATAACAGCTCCCGTGAGTTTTATCTTGAAGGAGGGGCCATGGTATTGGCAGATGGAGGTGTTGTCTGCATTGATGAGTTTGACAAAATGAGACCAGAAGACAGGGTTGCTATTCATGAAGCCATGGAACAGCAAACAATATCCATAGCCAAAGCAGGAATAACAACTGTTCTTAATTCAAGAACTTCTGTGCTTGCTGCTGCTAACCCTCCATCAGGACGTTATGATGACCTTAAGACTGCACAGGATAACATTGATTTGCAGACGACTATCCTTTCTAGGTTTGATTTAATCTTTATTGTGAAGGACATCAGAATGTATAGTCAAGACAAGATCATAGCCAGTCATATCATAAAGGTTCATGCATCGGCTAGTGCAACCATTGGTGAGGGTAGAGCTTCTAAAGAAGAAGGCTGGTTGAAGAGGTACATACAATATTGTCGAACGCAATGCCACCCTCGTCTATCAGAATCTGCAGCAACGTTACTACAGAATAATTATGTCAAAATCAGACAGGATATGAGACAGCAGGCAAATGAAACTGGGGAAGCTGCTGCAATACCCATTACTGTAAGGCAGTTGGAAGCTATCATTAGGTTGAGTGAAGCACTTGCAAAGATGAAACTATCTCATCTTGCTACTGAGGAGAATGTGCAAGAAGCAATAAGGCTTTTTACTGTTTCCACAATGGATGCAGCTAGGTCTGGAATAAACCAACAAATAAATCTTACACCTGAAATGGCCAATGAAATAAAGCAAGCTGAAACTCAGATAAAGAGAAGAGTTGGGATTGGGAACCACATATCAGAAAGAAGGCTTATTGATGATCTCAGCAGAATGGGAATGAATGAATCAATCCAGCACAAAGGAGATATGAAGACCCTGAATCCATGGCTGACCGCTAATCCTAGGATGTTACCTTCCCATTCAAAAGCTCCGACATTTAACGTTCGCTACTGTGTTGCTTCTTGCAGAATAAGTACTTCTCCACTTCGGTGTTTCTCTTCTTCAACTCAACCTCCTCGCAGGTGCGCAGTGCTTGGAGCTGGTTTTGCTGGGCTCTCGGTTGTTTGGCATTTGTTGAAGCATAGTCCTAGGGAGTTGCAGCTAATAATCGATATATACGATGAAGTGGGCGTTGGGGGTGGTGCTTCTGGAATTTCTGGAGGTCTCCTTCACCCTTATTCTCCAAAAGTTAAGCTTCTCTGGGAAGGTGCTCAGTGTTGGAAAGAAAGTATAAAGCTTTTGAGAATTGCTGAAGCAGTTTGTGTTAGAGAGGACTGCAAAATTGGAGAATCTGCTGAAAACGAGTCTCAGAGTTTCTTTACATTTCTGATGAAATCAGCTGACTTCAGGGGCATCATAAGACCAGCAATGGACATGAAGAATTTGACCAAACTGAATGATAATGTTCAGACTTGCCTTACCAGCTGCAGAATAGAAACCCTTAACAAAGAAGAGGCCGAAAAACTTGTACCTGGTCTATGCTTACCATTGAACAGAGCTTTCTATATGCCTGAAGCTCTGAATATCCATTCTCAGCACTATCTTCAGGCACTCTTCTGGGCATGCAAAAGTTTAGCAGAGGAATCCCCAGCATCCGCCTCTGAACAAAAACAGCTGAATTTGCACAAAAGATCTGTTCATAAACTGCTTGAGTTCGAAGGGGAATATGATGCTGTCGTCATATGCCTAGGTGCCAAAGTAAACACGCTTCCTGAGATCTCTGGGAGGCTTCCTTTGAGGACATGCAGAGGTGTTATTACGCACCTGGAGCTGCCCAATGACATAAGAGAAGGCTATCCAGACCAGGGGCCCTCAATATTATCAGATGCATGGCTTGCAGTTCAGGGTCCTCGCAGTATAAATGTGGGCTCAACATGGGAATGGAAATCCAGAAACTCATCACCAATTGTCTCAGACGATGAAGCTTCAAAAGCTCTTCAAGAGCTTTTGCCCAAGGCTTCTGCCACGTACCCAGGAATAAAGGATTGGGTTTTCACAGGAGCAAGGGCTGGTCTGAGGGCCATGCCACCACTGACTTCCCTCGGATCACTTCCACTTTTAGGTTGTATCAACGATTTTATAGGCGGAAATCGTACTTGTAAGTATTGGTTATTTGGAGGGTTAGGTTCAAGGGGATTGCTATACCATGGTTGGCTTGGGAATTTGACTGCACAGGCTGTGCTTTCTTGTAATGAAGGTATAATTCCATATGAACTGATTTCTTGGAAGAACAACATGAAATGA 3510 0.4427 MSGWDEGAVYYSDQAHSWDDGTGRGGDTEGTLSNHTILQKFKEFIRNFETEKNVFPYRESLVHNPKHLLIDMEDLDAFDADLPSKLRSAPADYLPLFEMAAAQVLVSLKAKVAGDTGVMEDQVIGDVQILLTSKEDPVSMRYLGAQYVSKLVKIAGITIAASRTKAKATYVTLICKNCKKGKQVPCRPGLGGAVVPRSCDHVPQAGEEPCPIDPWIVVPDKSKYVDQQTLKLQENPENVPTGELPRNMLLSVDRHLVQRVVPGSRLTVIGIYSIYQASNSSTSHKGAVAIRQPYIRVVGIEEANEAKSGGPAAFTPEEIEEFKKFATEPDAYKNICSKIAPSIFGHDDVKRAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDNSSREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASASATIGEGRASKEEGWLKRYIQYCRTQCHPRLSESAATLLQNNYVKIRQDMRQQANETGEAAAIPITVRQLEAIIRLSEALAKMKLSHLATEENVQEAIRLFTVSTMDAARSGINQQINLTPEMANEIKQAETQIKRRVGIGNHISERRLIDDLSRMGMNESIQHKGDMKTLNPWLTANPRMLPSHSKAPTFNVRYCVASCRISTSPLRCFSSSTQPPRRCAVLGAGFAGLSVVWHLLKHSPRELQLIIDIYDEVGVGGGASGISGGLLHPYSPKVKLLWEGAQCWKESIKLLRIAEAVCVREDCKIGESAENESQSFFTFLMKSADFRGIIRPAMDMKNLTKLNDNVQTCLTSCRIETLNKEEAEKLVPGLCLPLNRAFYMPEALNIHSQHYLQALFWACKSLAEESPASASEQKQLNLHKRSVHKLLEFEGEYDAVVICLGAKVNTLPEISGRLPLRTCRGVITHLELPNDIREGYPDQGPSILSDAWLAVQGPRSINVGSTWEWKSRNSSPIVSDDEASKALQELLPKASATYPGIKDWVFTGARAGLRAMPPLTSLGSLPLLGCINDFIGGNRTCKYWLFGGLGSRGLLYHGWLGNLTAQAVLSCNEGIIPYELISWKNNMK 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00679 1169 Gene3D - 140 275 IPR012340 -
Bach5g00679 1169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 649 IPR027417 -
Bach5g00679 1169 SMART mcm 136 650 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 Gene3D - 167 225 - -
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 141 156 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 567 582 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 643 660 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 167 179 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 291 303 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Bach5g00679 1169 Gene3D - 765 1149 IPR036188 -
Bach5g00679 1169 Pfam MCM N-terminal domain 39 110 IPR027925 -
Bach5g00679 1169 Pfam MCM AAA-lid domain 560 648 IPR041562 -
Bach5g00679 1169 SUPERFAMILY Nucleic acid-binding proteins 40 297 IPR012340 -
Bach5g00679 1169 Gene3D - 312 668 IPR027417 -
Bach5g00679 1169 Gene3D - 872 1098 - -
Bach5g00679 1169 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 34 684 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 FunFam DNA helicase 167 225 - -
Bach5g00679 1169 Pfam MCM P-loop domain 319 541 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 ProSitePatterns MCM family signature. 440 448 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bach5g00679 1169 ProSiteProfiles MCM family domain profile. 331 537 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 SUPERFAMILY Nucleotide-binding domain 763 1057 - -
Bach5g00679 1169 FunFam DNA helicase 32 120 - -
Bach5g00679 1169 FunFam DNA helicase 312 663 - -
Bach5g00679 1169 CDD MCM5 334 648 - -
Bach5g00679 1169 Gene3D - 32 118 - -
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein family signature 511 519 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein family signature 460 473 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein family signature 484 496 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein family signature 432 446 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 PRINTS Mini-chromosome maintenance (MCM) protein family signature 372 387 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bach5g00679 1169 Pfam FAD dependent oxidoreductase 765 1147 IPR006076 GO:0016491
Bach5g00679 1169 Pfam MCM OB domain 140 275 IPR033762 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00679 Bach-Chr5 4616142 4625917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00679 1 710 Core DNA Replication Machinery Family AT2G07690 78.028 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00679 K02209 - qsa:O6P43_003024 1276.92