Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00670 CTTTCCCTCACTCTGGTTTCTGATGCTGCAGAAAGACCTCAACTTTCTCTCTTTCTTGGTTCCTGTTTTTGGATCTTAGTACCAAGAACACCAATATAATGTAGTGGGAAAATAAAGAATTCTAAAAGCGCTTAAGCACTAGCGAATTAATGGCTTTTCAGGACCATCTTCCTCACGAAATATCTTTTCAGCCTTTCACTGATGAGCAACAGTTAAGTCAAAACAGAGACATGCAGAGGCTTCTACCACTGTCCTCCGCCGCCACCGCTGGTGGTGGAGGAGGAGGAGCTGCACCGACTTGGCTGAACAACGCCACTCTCCGGCAACAGAATTTCTTCCACTTACAACCAGAATCGTCCGCGCAAACCGGTGACGATGTCCGGGGGATAATACGCTCCGATAAAAGCATCGATTGCGGTGATCGGAACCGGACACAGAGCAATTGCGAATCTGAGGATTTAACAGAATACAAAGCAGACATTTTGGGACACCCTTTGTACGACCAGCTCCTATCAGCCCATGTTTCATGTTTAAGAATAGCCACACCGGTGGACCAGCTGCCTAGGATCGATGCTCAGCTGCAGCAGTCACACAGCGTGGTGGAAAAATACTCTGAGCTCGGAAATGGGGTAGTCGATGAGAAGGAGCTTGATCAGTTTATGACACATTATGTTCTATTGCTCTGTGCCTTCAAAGAACAACTGCAACAACATGTTCGTGTTCATGCCATGGAAGCAGTAATGGCTTGTTGGGAGCTTGAGCAGTCACTACAGAGCTTGACTGGTGTATCTCCGGGAGAAGGGACAGGTGCAACAATGTCGGATGATGAAGATGATCAAGAAGATAGCAATGCTAACTTATATGAAGGGAGTCTAGATGGTGCAGACAGCCTGGGCTTTGGTCCTCTTGTTCCCACCGAAAGTGAAAGATCTTTGATGGAGCGTGTGAGGCACGAGTTGAAGCATGAGCTAAAACAGGATTACAAGGTGAAAATTGTGGACGTAAGAGAAGAGATTCTGAGAAAGAGAAGAGCAGGGAAGCTGCCGGGCGACACCACTTCAGTTTTAAAATCTTGGTGGCAAACACATTCCAAGTGGCCCTACCCAACTGAGGAAGACAAGGCAAGGTTGGTGCAGGAAACTGGGTTGCAATTAAAGCAGATAAACAACTGGTTTATAAACCAAAGGAAAAGGAATTGGCACACTAACACTTCAACCTCCAATTCAACCAAAAGCAAGCGTAAGAGCAGTGCAGGTGAAAGCTGTAGTCAGAGCTTCATGTGA 1283 0.4661 MAFQDHLPHEISFQPFTDEQQLSQNRDMQRLLPLSSAATAGGGGGGAAPTWLNNATLRQQNFFHLQPESSAQTGDDVRGIIRSDKSIDCGDRNRTQSNCESEDLTEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSHSVVEKYSELGNGVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQEDSNANLYEGSLDGADSLGFGPLVPTESERSLMERVRHELKHELKQDYKVKIVDVREEILRKRRAGKLPGDTTSVLKSWWQTHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNTSTSNSTKSKRKSSAGESCSQSFM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00670 377 Pfam Homeobox KN domain 309 348 IPR008422 GO:0003677|GO:0006355
Bach5g00670 377 SMART KNOX2_2 156 212 IPR005541 GO:0003677|GO:0005634
Bach5g00670 377 SMART HOX_1 291 356 IPR001356 GO:0003677
Bach5g00670 377 Pfam KNOX1 domain 107 148 IPR005540 GO:0003677|GO:0005634
Bach5g00670 377 ProSiteProfiles 'Homeobox' domain profile. 289 352 IPR001356 GO:0003677
Bach5g00670 377 FunFam homeobox protein knotted-1-like 3 isoform X1 290 351 - -
Bach5g00670 377 CDD homeodomain 292 353 IPR001356 GO:0003677
Bach5g00670 377 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 126 361 - -
Bach5g00670 377 SUPERFAMILY Homeodomain-like 291 356 IPR009057 -
Bach5g00670 377 MobiDBLite consensus disorder prediction 349 377 - -
Bach5g00670 377 MobiDBLite consensus disorder prediction 211 237 - -
Bach5g00670 377 Gene3D - 288 367 - -
Bach5g00670 377 ProSiteProfiles ELK domain profile. 269 289 IPR005539 GO:0003677
Bach5g00670 377 Pfam KNOX2 domain 162 211 IPR005541 GO:0003677|GO:0005634
Bach5g00670 377 SMART KNOX1_2 105 149 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00670 Bach-Chr5 4560590 4563942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00670 107 371 Homeobox Transcription Factor Family AT5G11060 81.784 5.06e-161 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach5g00670 KNOX2 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00670 - - pcin:129320455 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00670 5 4560590 4563942 Bach2g01732 2 25749086 25752838 BWGD
Bach5g00670 5 4560590 4563942 Bach5g00670 5 4560590 4563942 ECH