Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00665 CTTTTGTCTCGCCCAGATGGGTGCGATCAATAGTCGAGCGGGGTCTCGCCCTTCTACTCCCCGAGTCAACCGCACCAGCCGCTTCGGACTATCCTCTCTTGTCTGTGGTGCCTCGTCCTCCCGTTCTACTTATGAGATGGAAGATCATCCAAGTGAACTTCAGGTAAATTCTGCAACAGACTTTCAGAAAGTCAGTGAGGAATCATCTTTACCATGTTGTAAAGAAGCTAGGATTAGTGGCACACATGGCGAAACTGCAACCTCATCTAATACAAGGATTGGATTTAGTGAGAATATTTTCTTTGAAAGTACTGCAAGAAATGTTGCCATTGGTAATCGGAGGAATGGCCTATGCGAAAGTAAGGAGATAGTTCCTCCTTATAAGGTAAGTTCTGATCATGAAACTTTTAGAGAAAGTATCAACACAGCTAGTACTTCATTTATAGAACATCAGTCTTCAGATCCAGTCTCTGTAAGTACTTCTACTAACAAGGATGCAGTCCATAATATTGGTAATTCAGTTGACAGTGGTGTCAGCCCTTTCTGTTGTGAGACAATGCGTCCAAGGAGCTCAACCACTCAAGAGCACGGAGGTTCCAGTTCCAATGAAATTTCTGTTGAGAATCCCATGGGTGCAGTTTTAGCCGTCCAGAATCCTGTTTCCCATCCGGTTGCTCATGTTTCCAATTTACCAGTAATGTCTCAGCTTCCAGAAAACGAACCTCATCAAGAGTCTATTCCTTCAGGTTTAGGACTTATTATGTCCAATTGGGAAAGTGGACAGGGAACTGAAAATGTGCTTCATCTTGATGTGGGCACTATATCTTCCAACATTTTATCTGGTGGCAATGCTGATGTCAGTGATCATGATGCCAGAAGGAATGGTAGAAGACTATTTTGGGATGCTTTTTCACAACGGAGCTCTAGAAGGCTAGATGATTCCCAAACCATTGTTTTCTCAACTGGTGAGACTGATGATCCAGGAACCCAAGATCAATGGTTTCTTGATTTGAGTGGTGATTTTTCAAATGATGGACATGGACGTGAGTCTGGATACATAGGAAGCAGAATTCACAGATTGAATGAACGAATGCGGCGTTCTAGATCAGAGATCTTGGAAAGACTTCGTGGAGGCCTTGATGAGATTGGTCGTTGGAATACTTCTTGTCCATCGGGACTCCACCCAGATGGCATGTGCCCATGTGATTCCTTCTCAATGACTGAAGAATCTAGCACCCGAGCAAGTATATCAAGAGTAGTCTTGCTTGCTGAAGCTTTGTTTGAGGTTTTGGATGAAACCCATCGCCAACCTGTTTCACTTTCCCTATCCATGGTCTCACTCCCAGCTCCAGAATCAATTGTTGACTCTTTTCCTCTGAAATGCCATAAGAAGGCTGATGCAGCTAATGGTGGCAATGATGCTGAACAATGTTACATATGCCTGTTGGATTATGAAGGTGGAGACAAAATAAGAGTGCTTCCTTGCAACCACGAGTATCACATGTCATGTGTCGATAGGTGGCTGAAGGAGATACATGGAGTATGCCCCCTTTGTCGTGGGAATGTTTGTGGAGGGTTCACTGACTCTTCTGCCTCTTAA 1600 0.44 MGAINSRAGSRPSTPRVNRTSRFGLSSLVCGASSSRSTYEMEDHPSELQVNSATDFQKVSEESSLPCCKEARISGTHGETATSSNTRIGFSENIFFESTARNVAIGNRRNGLCESKEIVPPYKVSSDHETFRESINTASTSFIEHQSSDPVSVSTSTNKDAVHNIGNSVDSGVSPFCCETMRPRSSTTQEHGGSSSNEISVENPMGAVLAVQNPVSHPVAHVSNLPVMSQLPENEPHQESIPSGLGLIMSNWESGQGTENVLHLDVGTISSNILSGGNADVSDHDARRNGRRLFWDAFSQRSSRRLDDSQTIVFSTGETDDPGTQDQWFLDLSGDFSNDGHGRESGYIGSRIHRLNERMRRSRSEILERLRGGLDEIGRWNTSCPSGLHPDGMCPCDSFSMTEESSTRASISRVVLLAEALFEVLDETHRQPVSLSLSMVSLPAPESIVDSFPLKCHKKADAANGGNDAEQCYICLLDYEGGDKIRVLPCNHEYHMSCVDRWLKEIHGVCPLCRGNVCGGFTDSSAS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00665 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 437 518 IPR013083 -
Bach5g00665 527 SUPERFAMILY RING/U-box 466 517 - -
Bach5g00665 527 Pfam Ring finger domain 471 514 IPR001841 -
Bach5g00665 527 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 1 527 - -
Bach5g00665 527 SMART ring_2 472 513 IPR001841 -
Bach5g00665 527 FunFam Putative RING zinc finger domain superfamily protein 439 519 - -
Bach5g00665 527 ProSiteProfiles Zinc finger RING-type profile. 472 514 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00665 Bach-Chr5 4539853 4543338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00665 343 518 C3H Transcription Factor Family AT5G45290 47.449 1.59e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00665 - - gmx:100783604 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00665 5 4539853 4543338 Bach5g00665 5 4539853 4543338 ECH