Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00662 ATGTGTGTGCAGGACGCGGAACAAGTTGCCCAAGATATGGAGAACCTCGACAACAGGAGGAAGTCATGGCCTTTGCATTGTGAGCCCTTGCCTACCCAGATGGACAACTCGGAAAAAGGATCTCCCTTGAAATCTCCCAGTGAACGTCTGGAAAGCATATGTGAGGATACAGTGATTGCAGACAAAAAACAGAATCCGATGAACTTCATCCCCTCTCTTAGGTCTGGAGAGTGGTCAGATATAGGAGGTCGTCCTTATATGGAGGATACCAATATATGCATTGGAGACTTGGCAACGAAGTTCGGTTTTGATTTTCTTAGTGAGGAAGCTATTTCATTTTATGGTGTATTTGATGGACATGGAGGGACGAGTGCTGCACAATTTGTCCGCGATCATCTGCCAAGAATCATGGTTGAGGATGCCAGCTTCCCTTTGGAGCTTGAGAAGGTTGTCACAAGGTCATTTTTGGAGACAGATGCTGCATTCGCAAAGACATGTTCTCTTGAGTCTTCCCTTTCTTCTGGTACAACTGCACTAACAGCAATTATATTTGGAAGGTCTTTACTTGTAGCCAATGCTGGAGACTGTCGAGCTGTTTTGTCCCGACATGGAGGAGCCATAGAAATGTCCAAAGATCATAGACCATTTTGTAGCAAAGAAAGAAGACGGATCGAGTCGCTGGGTGGCTTCATTGATGATGGTTACCTGAATGGCCAGTTAGGTGTGACTCGTGCTCTTGGTGACTGGCATCTTGAAGGATTGAAGGAAATGAGTGAAAGAGGTGGACCATTGATTGCTGAGCCAGAACTTAAACTGATAACATTGACAAAAGAAGATGAGTTCTTGATAATTGGCAGTGATGGTATCTGGGATGTTTTCTCTAGCCAAAATGCGGTAGATTTTGCTCGTAGGAGGCTTCAAGAGCATAATGATGTTAAACTATGCAGCAGGGAAATAGTGGAGGAAGCAATAAAGAGAGGATCAACAGACAATTTGACAGTGGTGATGGTGTGTTTTCACTCAGATCCACCGCCACCCGTGGTAGTAGAAAGGCCAAGAGTCAGGAGAAGTATTTCTGCTGAGGGACTTCAGAACCTTAGGTGCCATCTGGAAGGATAA 1119 0.4495 MCVQDAEQVAQDMENLDNRRKSWPLHCEPLPTQMDNSEKGSPLKSPSERLESICEDTVIADKKQNPMNFIPSLRSGEWSDIGGRPYMEDTNICIGDLATKFGFDFLSEEAISFYGVFDGHGGTSAAQFVRDHLPRIMVEDASFPLELEKVVTRSFLETDAAFAKTCSLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRHGGAIEMSKDHRPFCSKERRRIESLGGFIDDGYLNGQLGVTRALGDWHLEGLKEMSERGGPLIAEPELKLITLTKEDEFLIIGSDGIWDVFSSQNAVDFARRRLQEHNDVKLCSREIVEEAIKRGSTDNLTVVMVCFHSDPPPPVVVERPRVRRSISAEGLQNLRCHLEG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00662 372 CDD PP2Cc 74 339 IPR001932 -
Bach5g00662 372 ProSiteProfiles PPM-type phosphatase domain profile. 74 339 IPR001932 -
Bach5g00662 372 ProSitePatterns PPM-type phosphatase domain signature. 113 121 IPR000222 GO:0043169
Bach5g00662 372 SUPERFAMILY PP2C-like 66 340 IPR036457 -
Bach5g00662 372 SMART PP2C_4 64 337 IPR001932 -
Bach5g00662 372 Gene3D - 56 342 IPR036457 -
Bach5g00662 372 Pfam Protein phosphatase 2C 87 331 IPR001932 -
Bach5g00662 372 MobiDBLite consensus disorder prediction 14 46 - -
Bach5g00662 372 FunFam Probable protein phosphatase 2C 22 57 342 - -
Bach5g00662 372 PANTHER PROTEIN PHOSPHATASE 2C 61 337 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00662 Bach-Chr5 4525868 4529481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00662 63 372 PP2C-type Phosphatase Gene Family AT2G25620 61.783 1.09e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bach5g00662 PP2C 5.1e-68 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00662 K14803 - gmx:100782648 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00662 5 4525868 4529481 Bach2g01740 2 25803403 25806191 BWGD
Bach5g00662 5 4525868 4529481 Bach5g00662 5 4525868 4529481 ECH