Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00660 ATGGGAAGTAGTGGTACCGAGAAGATCCCTATGGATGGCATCACAGAAGGTTCTGGGACAATCATTCAGATAAAGATAAAAACATTGGATTCACAAACTTACACTCTCAGAGTGGACAAACAGGTGCCAGTACCTGCTCTAAAAGAACAGATTGCATCTGTAACTGGTGTATTATCAGAGCAACAGCGCTTAATTTGCAGAGGGAAAGTTCTAAAGGATGATCAGCTACTCTCTGCCTACCATGTTGAAGATGGTCATACCTTGCATCTGGTTGTTAGGCAACCTGATTTGCCATCACCAGGGAGTTTGCCCAACCATTCAGCAACTGACCCAAATTCAAGTACAAGCCATGTTCGCAGAACTCAAGTAGCCCCTGGTGTATTCATTGAAACTTTTAATATACCTGCTCAGGGAGATGGCGTTTCTCATGGTGTTTCTCCTGAAATGAACAGGATTGTTTCTGCTGTTTTAGGATCTATTGGACTTTCAAATATTTTAAGTGGCAACGAAGGGATTGATGTCAGGGAACAAGACTCCCAAGGGCTTGGAAGAACATCAGGTTCTAGTGGCATGCCAGATTCATCCCATCCTCAACCTGAACAAGCTGGTATGCGGAATGCATCTGATAGATTGCGTGATAGATTGCGTTATAACTTTGGACTTCCAACAGCAGTCTCTTTGGGACCTTTACAACCTCGTGTCATTCCTGATTCATTGACGACTTTGTCCCTGTACCTGAGTCATATAAGGCAGGAATTTGATGCCATTGTCAGAGAAGGAGGAAATGATGTCCAAGCAACTGAGGCTCACAGGAATGAAGAAATAGGATCCTTCTCTTCTTCACATCCAGATTCTACACCTGAAGCACTCTCATCACCTGCTTCATTGGCTGAACTCTTGCTTTCTACCAGACAAATGTTCACTGAACAAGCTAGCGAGTGCTTACTTCAACTTGCAAGGCAACTGGAGAATCAAGGGGGTGTGACTGATCCATTGTTGCGGTCAAGCACTCAGTCTAGGGCTTGGAGAACTGGAGTTCTATTATATAATCTTGGTGCATTTTTACTTGAGCTTGGCCATACTTCCATGACATTGCATTTGGGTCAAACACCGTCTGAAGCTGTTGTTAATGGTGGACCTGCAAGTTTTATATCCCCATCTGGTCCTAATAATATCATGGTTCAGCCTCTTTCTTTTCAATCTGGAGGAAGCTTTGGTGCTGTCCCCATGGGAGCTGCCCAGTCTGGTTCTGGTTTAGGTAGTGGACTTGGTTCAAGTTTTTTCCCAAGGCGTATTGATATACAGATACGACAAGGTTCATCAACAACAATGTCCAATGTGGATCAAGAAGAACACGGTGACACTATTTCTGCATTAGCACAAAGAAATACTTCTGTAAGTCAAGCAGCCTCCAGACTTGCAGAGGATCCATCTTTTTCTGGGGAGTCGGGAGTACGGATAGTACCAATTAGAACCATGGTTGCAGCAGTACCCACTTCCTTAGGTCGCTTCCCTTCTGAATCATCTGGTGATCCTGTAGAGCTTTACTGTCCACTTCCTGGGAGATTTCAACATGTATCTTCTGGGCATGGCAATAGTGAACAGGGATCTCAATCATCTGGTCAGCAGCAGCCCATACTTCAATTCACGGTGCAAAGGCAAGGCAATGAAGATCCTGCAAGAAATGCTAGTAGAGCCCAAATCAACCAAGATTCTGAGAGACAGATACCCGACGGTGTACTTGATTATATAAGGGCACTTCTTGTTAGTGGTCAAATTCGTGTGGTAGATTCCAATTTACAGGGAACAACTGCTGCTACCTCAGCGGATGCTGGAGCACCGAGTGGTGCCGCTCATGTCCCTGAAGCCGAAGCTAGAGTCAGTCATGAAGGAATATTTTTGTCTAATCTACTCCGCGAGATCATGCCCTTGATACCTCACCAAGCAGGATCTGAGATACGCACTGCCCCAGAAACAGAAGGTGAAAATGCTTCAAGGGTTCAAATGGGACAAGATTCTTCCACCCAGGATGGGACTGATATAGCGACATCACGCAGACAGAATGATTCTGAAACAAGCCCTCCTCCTAGTCCAAAACGGCAGAAGGGTGATTCAGAGTAA 2121 0.4503 MGSSGTEKIPMDGITEGSGTIIQIKIKTLDSQTYTLRVDKQVPVPALKEQIASVTGVLSEQQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPSPGSLPNHSATDPNSSTSHVRRTQVAPGVFIETFNIPAQGDGVSHGVSPEMNRIVSAVLGSIGLSNILSGNEGIDVREQDSQGLGRTSGSSGMPDSSHPQPEQAGMRNASDRLRDRLRYNFGLPTAVSLGPLQPRVIPDSLTTLSLYLSHIRQEFDAIVREGGNDVQATEAHRNEEIGSFSSSHPDSTPEALSSPASLAELLLSTRQMFTEQASECLLQLARQLENQGGVTDPLLRSSTQSRAWRTGVLLYNLGAFLLELGHTSMTLHLGQTPSEAVVNGGPASFISPSGPNNIMVQPLSFQSGGSFGAVPMGAAQSGSGLGSGLGSSFFPRRIDIQIRQGSSTTMSNVDQEEHGDTISALAQRNTSVSQAASRLAEDPSFSGESGVRIVPIRTMVAAVPTSLGRFPSESSGDPVELYCPLPGRFQHVSSGHGNSEQGSQSSGQQQPILQFTVQRQGNEDPARNASRAQINQDSERQIPDGVLDYIRALLVSGQIRVVDSNLQGTTAATSADAGAPSGAAHVPEAEARVSHEGIFLSNLLREIMPLIPHQAGSEIRTAPETEGENASRVQMGQDSSTQDGTDIATSRRQNDSETSPPPSPKRQKGDSE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00660 706 MobiDBLite consensus disorder prediction 524 543 - -
Bach5g00660 706 MobiDBLite consensus disorder prediction 661 700 - -
Bach5g00660 706 MobiDBLite consensus disorder prediction 553 573 - -
Bach5g00660 706 MobiDBLite consensus disorder prediction 652 706 - -
Bach5g00660 706 SMART ubq_7 22 93 IPR000626 GO:0005515
Bach5g00660 706 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 15 702 - -
Bach5g00660 706 MobiDBLite consensus disorder prediction 179 202 - -
Bach5g00660 706 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Bach5g00660 706 MobiDBLite consensus disorder prediction 526 543 - -
Bach5g00660 706 PRINTS Ubiquitin signature 53 73 IPR019956 -
Bach5g00660 706 PRINTS Ubiquitin signature 32 52 IPR019956 -
Bach5g00660 706 PRINTS Ubiquitin signature 74 95 IPR019956 -
Bach5g00660 706 MobiDBLite consensus disorder prediction 178 206 - -
Bach5g00660 706 FunFam Large proline-rich protein BAG6 14 107 - -
Bach5g00660 706 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Bach5g00660 706 Gene3D - 18 116 - -
Bach5g00660 706 MobiDBLite consensus disorder prediction 94 119 - -
Bach5g00660 706 SUPERFAMILY Ubiquitin-like 17 101 IPR029071 -
Bach5g00660 706 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00660 Bach-Chr5 4513596 4519411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00660 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 40.278 7.82e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00660 K23390 - gmx:100783070 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00660 5 4513596 4519411 Bach5g00660 5 4513596 4519411 ECH