Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00609 ATGTCGAGCGGCAGCATCGATGTTGCGCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGCAGCCTATTTGACATCGTGACCGTCCGATGTGGGCACTGCACCAATCTATGGTCTGTGAACATGGCCGCAGCATTTCAGTCACTGTCGTGGCAAGATGGTCAGGGAACTGGCTACTCCAATCCAGAGTATAGAATTGACACAGGCACCTCTTCCAAATGCAACAACAGGCTTGCAATGCGAGCACCCACCACGCATGTAACTGAGGAAAGGGTGGTGAACCGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTTATAAAGGAAGAGATTCAGAGGATCAAGGCCAATAATCCAGATATCAGTCACAGAGAAGCATTCAGTACTGCTGCTAAGAATTGGGCACACTTCCCTCATATTCATTTTGGACTGATGTTGGAGACCAACAATCAAGCTAAGCTGGACAATGGTTCTGAGAAGCATTTAATGTCAAGGGCTGCAGTGTACAACAAATGA 561 0.4848 MSSGSIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDGQGTGYSNPEYRIDTGTSSKCNNRLAMRAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKLDNGSEKHLMSRAAVYNK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00609 186 CDD HMG-box_SF 113 149 - -
Bach5g00609 186 SUPERFAMILY HMG-box 103 152 IPR036910 -
Bach5g00609 186 FunFam Axial regulator YABBY 104 174 - -
Bach5g00609 186 Pfam YABBY protein 9 159 IPR006780 GO:0007275
Bach5g00609 186 PANTHER PROTEIN YABBY 6-RELATED 1 168 IPR006780 GO:0007275
Bach5g00609 186 Gene3D High mobility group box domain 98 154 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00609 Bach-Chr5 4095527 4098667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00609 8 169 C2C2-YABBY Transcription Factor Family AT2G26580 77.778 1.62e-93 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bach5g00609 YABBY 1.2e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00609 K25796 - gmx:100804731 360.533