Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00600 ATGGTCCAATCAAAGAAATTCAGAGGTGTCAGGCAGCGGCACTGGGGCTCTTGGGTCTCTGAGATTCGCCACCCACTTCTGAAGAGAAGGGTGTGGCTTGGCACATTTGAGACAGCAGAGGAAGCAGCTCGAGTCTATGATCAAGCTGCTATTTTGATGAATGGCCGAAATGCCAAAACCAATTTCCCAGTCGATCAAACTGCAGAAGGTGACCCCAAGGCAGCAACTGAGAATCACCCATCTTCTCCATATGATCTGCAGGAAATCCTACACTCAAAGCTTCAAAAATGCAGCAAGGTACCCTCTCCTTCAGTGACCTGCTTGAGGCTTGACACTGAGAATTCTCATATAGGAGTCTGGCAAAAGCGTGCCGGTCAACGTTCAGACTCCAACTGGGTCATGAGGGTTCATCTTGAAAAGAAAAATACCAATGGTGATGAAAATCATAGTGCTCTTCGGCCTTCATCTGATTCCCCAGCAGTGACAGGGCAAGAACTGATGACAGCAAAAATTGATGATGAACAGATAATTGCCCTACAAATGATAGAAGAGCTTCTCAACAGGAACTGTCCAAGTCCAAGCCCTTCACTTAATAACATTGAAAAAAAGGATGCAAGTTTTTTACTTTAG 630 0.454 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARVYDQAAILMNGRNAKTNFPVDQTAEGDPKAATENHPSSPYDLQEILHSKLQKCSKVPSPSVTCLRLDTENSHIGVWQKRAGQRSDSNWVMRVHLEKKNTNGDENHSALRPSSDSPAVTGQELMTAKIDDEQIIALQMIEELLNRNCPSPSPSLNNIEKKDASFLL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00600 209 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 FunFam Ethylene-responsive transcription factor 2 5 65 - -
Bach5g00600 209 MobiDBLite consensus disorder prediction 61 82 - -
Bach5g00600 209 MobiDBLite consensus disorder prediction 190 209 - -
Bach5g00600 209 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Bach5g00600 209 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Bach5g00600 209 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 Pfam AP2 domain 6 55 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bach5g00600 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00600 Bach-Chr5 4017348 4018129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00600 1 189 AP2-EREBP Transcription Factor Family AT1G15360 57.426 5.00e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach5g00600 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00600 - - qsu:112002896 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00600 5 4017348 4018129 Bach2g01816 2 26360366 26361161 BWGD
Bach5g00600 5 4017348 4018129 Bach12g00501 12 3411493 3412314 ECH
Bach5g00600 5 4017348 4018129 Bach5g00600 5 4017348 4018129 ECH