Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00577 ATGGACGAACATTTGCTGAAGGGGAACACAGATTGTGTTTATTTCTTGGCCTCTCCCCTCACTTGCAAGAAGGGGGTTGATTGTGAGTACCGGCATAATGAGATGGCAAGGATGAATCCAAGAGATTGCTGGTACTGGTTTTCTGGGAATTGCCTTAATCCAACATGTGCTTTTAGACACCCTCCATTGGATGGACATACTGGAGGATCTTCTGAGTCTTCTTTACCTGAGAAGAAGACACTGGCTCCCTGTTATTTTTACTTCAATGGATTTTGCAGCAAAGGTGACAGATGCTCATTTTTCCATGGACCTGATGATAGTATATCTACTGTCAAGTCTGTCAAGAATTCCTCTGAAAGCACCGTTGCAGTTTTGCTAGAAAATAAAACATCATCAGGAAATAAAACAGGTGCAGCAGCAACACTGACTGAAAAATATCTTAGTCCATCTGAAACTTCTCCAAAGGCTCCTCTTGATTTTAAATTTCAGCCTAAGGAAGATCTTCAGCAACCAGTACCCGAAAATGTCAAGCCACAAAGTGATTCCCCACAGATCTCTAGTTATGAGGATAGAGAGCCCAATGTGAATAGGTCAGATTCCATCTTTTCTGTAGATGGCTCTGTTCACGGCACGTCACATTTATGCATTGAGCAGAGTTTAGGGGAGCAAGTGAATACTGATCACATAGAGCCTGAGGAGCGATGGGAATCTTCTCCTGGATTTGATGTTCTTGTTGATGAGTCAGAGAACTTGGGTTGTGAGGATAATTCTGAATATTTACCAGTGCTTGATAGGGAACAAAGGGAAATGACTGGGCAATACTTGGGCCCAGAAGCTGACATTCTGTACGAACCAGAAATATATGATGGTTACAGATATTTAGATCACGAGCAGAATCTTGCCATTGACAGGAAAGTTCGATCTTATTATGCGAAAGAGATAGTTGTAGATTCTATATTTTCCAGGAAGAGGATTTACATGCCAGATGAGATGACTGCTTGTGACAGGAACATAGATCTACGGGACTATCTGAGGACATGCAGGGAATTTAGTGGTCAGTCTGTTACAGGCTTCTTAAGAAGTGATGAATCATCTCATCTGATGGTTCAAAGTGAGGAGAGGCATCAAAACCGAAGCATTGATCAGCGGATAAGTAGAAGATTGACATCAGAAGTGGGATTGAAGACCAGTGGCTCACTTGGAGAAGGTGGAACTCTTTCGATCTCAAACAAGCTTGGTTTATTCAGGCATTCACAGCAACGTAGGTCAAGGAAACATTACAGATCCAGGAAACTAGTTTCAAAGGAAAGGAGATCTATTCAGGAGTCCACTGCTTTTACAGGACCCAAGACTCTAGCACAAATTAAAGAAGAGAAGAAGGCTGAAGAAAATAGGCATTTTAAAAGCACATCATCCGACTTCCAGGATCCCAAACCTCTGAGTGAAATCCTCAAGAACAAAAGAAGGTTGTGTTGTGTCAGTGATGGAAATACCTGCGACAATGGAATGATGAGATCAAGATGA 1524 0.4199 MDEHLLKGNTDCVYFLASPLTCKKGVDCEYRHNEMARMNPRDCWYWFSGNCLNPTCAFRHPPLDGHTGGSSESSLPEKKTLAPCYFYFNGFCSKGDRCSFFHGPDDSISTVKSVKNSSESTVAVLLENKTSSGNKTGAAATLTEKYLSPSETSPKAPLDFKFQPKEDLQQPVPENVKPQSDSPQISSYEDREPNVNRSDSIFSVDGSVHGTSHLCIEQSLGEQVNTDHIEPEERWESSPGFDVLVDESENLGCEDNSEYLPVLDREQREMTGQYLGPEADILYEPEIYDGYRYLDHEQNLAIDRKVRSYYAKEIVVDSIFSRKRIYMPDEMTACDRNIDLRDYLRTCREFSGQSVTGFLRSDESSHLMVQSEERHQNRSIDQRISRRLTSEVGLKTSGSLGEGGTLSISNKLGLFRHSQQRRSRKHYRSRKLVSKERRSIQESTAFTGPKTLAQIKEEKKAEENRHFKSTSSDFQDPKPLSEILKNKRRLCCVSDGNTCDNGMMRSR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00577 507 Gene3D - 71 136 - -
Bach5g00577 507 Gene3D - 6 70 - -
Bach5g00577 507 ProSiteProfiles Zinc finger C3H1-type profile. 78 105 IPR000571 GO:0046872
Bach5g00577 507 ProSiteProfiles Zinc finger C3H1-type profile. 6 35 IPR000571 GO:0046872
Bach5g00577 507 MobiDBLite consensus disorder prediction 457 472 - -
Bach5g00577 507 MobiDBLite consensus disorder prediction 173 196 - -
Bach5g00577 507 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 1 494 - -
Bach5g00577 507 Pfam RNA-binding, Nab2-type zinc finger 83 103 - -
Bach5g00577 507 SMART c3hfinal6 39 62 IPR000571 GO:0046872
Bach5g00577 507 SMART c3hfinal6 79 104 IPR000571 GO:0046872
Bach5g00577 507 SMART c3hfinal6 7 34 IPR000571 GO:0046872
Bach5g00577 507 MobiDBLite consensus disorder prediction 457 479 - -
Bach5g00577 507 SUPERFAMILY CCCH zinc finger 78 103 IPR036855 GO:0046872
Bach5g00577 507 MobiDBLite consensus disorder prediction 169 196 - -
Bach5g00577 507 MobiDBLite consensus disorder prediction 417 433 - -
Bach5g00577 507 Pfam Zinc-finger containing family 9 63 IPR041686 -
Bach5g00577 507 ProSiteProfiles Zinc finger C3H1-type profile. 37 63 IPR000571 GO:0046872
Bach5g00577 507 FunFam Zinc finger CCCH domain-containing protein 17 1 63 - -
Bach5g00577 507 MobiDBLite consensus disorder prediction 415 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00577 Bach-Chr5 3911846 3914572 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach5g00577 zf-CCCH_3 1.3e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00577 - - aprc:113847503 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00577 5 3911846 3914572 Bach5g00577 5 3911846 3914572 ECH