Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00573 ATGAGTTTTCCTGATCATTCTCCACCCTTTATGCTGTCGCCGCCGCCTTTTGCTGTAGATACCGATGCCATAGATGCATGGTCTCAATTCCAAATTCCCAATGAACAATTCGACCCGCATTCGCAGTATGAGCAGGCTCCTTCATTCAAGAGGGCCAGGACTTCTGAGACCATCCCCATTAATTCCAGGATGCACCCACCAAATCCAATCAACAAAGGAACAAGTCATATCTTCTTCAAGACCCGCATGTGTGCAAAATTCAAAATGGGTTTGTGTAGGAACGGTGAAAATTGCAACTTTGCACATGGCATTGAAGATATGAGACAGCCACCACCAAATTGGCAAGAACTTATTGGCATGCGTGACGAAGTTCGGTCATCGGGTAATTGGGATGATGACCAAAAAATAATTCATAAGATGAAGTTATGCAAGAAATATTACAATGGTGAGGAATGCCCTTATGGCGATAGGTGTAATTTTCTTCATGAAGACCCAGCTAAGTTCAGAGATGATTCTGGGAGGTACAGAGAAAGTTCAGTAATAAGCATTGGAACCAATGGATCGCCAAAGTCGCAAGCTAATGGTTCTGTCAATTCTGACAGTAATAGGCTTGTGAACACAGGCTTGGATGTTCAATTAAATGCGAAGTCTGCGTTTTGGAAGACCAAGTTGTGTATCAAGTGGGAGACAACAGGTCAATGCGGATTCGGCGATAAGTGTCACTTTGCTCATGGTCAAGAAGAGTTACAAGGGCCTGTTGGACGCATTGAAACAGAAGCTACAAGCTCCATTTTAGGTGTATCGAAATCTATATCAGTTCCTGTCCATGATGCAATTCCTTGCAATACCGAAGCAATTCCAAGTGCTTCAAATGAAGACGAGCAGGGTAAGAAGTCTTTACTGAAGGGGAAAGGACCTAAGAAGATTAATCGAATTTATGCTGATTGGCTTGATGATGTACCTCTTGTGCACAGCTTGCCAAGGAAAGTGGAGAGTTAG 999 0.4324 MSFPDHSPPFMLSPPPFAVDTDAIDAWSQFQIPNEQFDPHSQYEQAPSFKRARTSETIPINSRMHPPNPINKGTSHIFFKTRMCAKFKMGLCRNGENCNFAHGIEDMRQPPPNWQELIGMRDEVRSSGNWDDDQKIIHKMKLCKKYYNGEECPYGDRCNFLHEDPAKFRDDSGRYRESSVISIGTNGSPKSQANGSVNSDSNRLVNTGLDVQLNAKSAFWKTKLCIKWETTGQCGFGDKCHFAHGQEELQGPVGRIETEATSSILGVSKSISVPVHDAIPCNTEAIPSASNEDEQGKKSLLKGKGPKKINRIYADWLDDVPLVHSLPRKVES 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00573 332 Gene3D - 72 109 - -
Bach5g00573 332 Gene3D - 134 166 - -
Bach5g00573 332 Gene3D - 213 251 - -
Bach5g00573 332 ProSiteProfiles Zinc finger C3H1-type profile. 78 105 IPR000571 GO:0046872
Bach5g00573 332 FunFam Zinc finger CCCH domain-containing protein 73 109 - -
Bach5g00573 332 SUPERFAMILY CCCH zinc finger 76 109 IPR036855 GO:0046872
Bach5g00573 332 SUPERFAMILY CCCH zinc finger 137 164 IPR036855 GO:0046872
Bach5g00573 332 PANTHER CCCH ZINC FINGER/TIS11-RELATED 190 253 IPR045877 GO:0003729
Bach5g00573 332 ProSiteProfiles Zinc finger C3H1-type profile. 219 247 IPR000571 GO:0046872
Bach5g00573 332 FunFam Zinc finger CCCH domain-containing protein 214 251 - -
Bach5g00573 332 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 220 246 IPR000571 GO:0046872
Bach5g00573 332 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 79 103 IPR000571 GO:0046872
Bach5g00573 332 SMART c3hfinal6 137 164 IPR000571 GO:0046872
Bach5g00573 332 SMART c3hfinal6 219 246 IPR000571 GO:0046872
Bach5g00573 332 SMART c3hfinal6 78 104 IPR000571 GO:0046872
Bach5g00573 332 MobiDBLite consensus disorder prediction 284 303 - -
Bach5g00573 332 SUPERFAMILY CCCH zinc finger 218 250 IPR036855 GO:0046872
Bach5g00573 332 ProSiteProfiles Zinc finger C3H1-type profile. 137 165 IPR000571 GO:0046872
Bach5g00573 332 Pfam CCCH-type zinc finger 141 162 IPR041367 -
Bach5g00573 332 MobiDBLite consensus disorder prediction 179 200 - -
Bach5g00573 332 FunFam Zinc finger CCCH domain-containing protein 39 134 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00573 Bach-Chr5 3895722 3897485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00573 218 266 C3H Transcription Factor Family AT1G68200 43.137 6.05e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach5g00573 zf-CCCH 2.2e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00573 - - gmx:100793865 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00573 5 3895722 3897485 Bach5g00573 5 3895722 3897485 ECH