Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00556 ATGAAAGGGGACGTGCAGCTAGAGCCACCAATGATACGACAAATCCCTAATGATTCCGACCCTTTACTCGATAACCAGGAGGGGTCGTCTCGGGGAAGCTCCAGTGAGATTCGGGATGAGGATATCGAGGCCGGCTCAATTCCTTGCTGTAGAATTTGTCTGGAAAGCGATTCCGAGCCAGATGATGAAATGATATCTCCATGCATGTGCAAAGGGACCCAACAGTTTGTCCATCGTTCATGTCTTGATCACTGGCGCTCAGTTAAGGAAGGATTTGCCTTTTCACATTGCACAACTTGCAAAGCCCAATTTCATCTTCGAGTTGAATTGTATGAGGACAACTCTTGGCGTGAAATAAAGTTCAGACTTTTTGTGGCAAGGGATGTTTTCCTTGTCTTTTTGGCTGTACAAACTGTGATCGCTGCAATAGGGGGCTTTGCTTACTTCATGGACAAAGATGGGACCTTCAGGAACTCCTTCAGTGATGGTTGGGATCGGATACTGTCAAAACATCCTATACCATTTTATTATTGTATTGGAGTAATGGCCTTCTTTGTGCTGCTTGGGTTTTTTGGTCTTATTCAACACTGCTCCTCCCTTAATACCAACGACCCCAGATTGGCTGGTTGTCACAACTGTTGTTATGGGTGGGGCATCTTGGATTGCTTTCCTGCATCAATGGAGGCATGCTTTGCCCTTGTGGTTGTCTTTGTAGTCATCTTTGCAATTCTTGGTATAGCTTATGGCTTCCTTGCGGCCACCATGGCTATTCAAAGAATTTGGCAGAGACACTACCACATCCTTACCAAGAGGGAGCTCACAAAGGAATATATAGTGGAGGATCTCCATGGTTGTTATTCCCCGCCAAAGCTGGACGGAGAACACATAGAACGCCTGAAAATGCTTAAGCTTTTGTAATTAACGCGACATGAATTAAATGTCTTTTGAAATGTTCAAGACTGAATTGTTGCTTTAATTGTAAGTTGCACGGCAGTGGTGTTCGACCGAGCATGGGAAATAATGGTTTTATCTGGATTATCGCCAGATCTTGTACCCTAAAACTCGCTACAGCAAAAAAACGAAGAAAAATGTTAACCATGTACGTGGTTGTCTATGCATGCTTAGCCTTTG 1131 0.4412 MKGDVQLEPPMIRQIPNDSDPLLDNQEGSSRGSSSEIRDEDIEAGSIPCCRICLESDSEPDDEMISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVELYEDNSWREIKFRLFVARDVFLVFLAVQTVIAAIGGFAYFMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVMAFFVLLGFFGLIQHCSSLNTNDPRLAGCHNCCYGWGILDCFPASMEACFALVVVFVVIFAILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGCYSPPKLDGEHIERLKMLKLL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00556 305 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 115 IPR013083 -
Bach5g00556 305 ProSiteProfiles Zinc finger RING-CH-type profile. 42 107 IPR011016 GO:0008270
Bach5g00556 305 Pfam RING-variant domain 50 100 IPR011016 GO:0008270
Bach5g00556 305 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 11 305 - -
Bach5g00556 305 CDD RING_CH-C4HC3_MARCH 50 101 - -
Bach5g00556 305 MobiDBLite consensus disorder prediction 1 39 - -
Bach5g00556 305 SUPERFAMILY RING/U-box 48 105 - -
Bach5g00556 305 SMART ringv_2 49 101 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00556 Bach-Chr5 3792747 3795817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00556 1 305 C3H Transcription Factor Family AT1G11020 77.259 3.43e-166 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00556 - - zju:107432369 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00556 5 3792747 3795817 Bach5g00556 5 3792747 3795817 ECH