Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00553 TTTGTTTTAGGTTTTAATCTAAATTTCTCAGAGCTTTTTTTCAGAAAAGGGTTAGGAGGTGTGGATTCACGCAAGCAAAATAAAACTCATTCAGTTTTATGTGAATTAGCGTTTCCCACCTGTGTTTTTAATACCGCCATTTTTCTGCATTAATCTCTCTGGTCAAGATAGTGTTAGCGTTTTCCTCACTCACCACCAACTGCTTTGCTCAGTCCTTCTAGTGATGTCACTTCTGATCTTTCTTTTGGTTTAATTGTGCGTGCCTTAGGGTTTCTCAAACATTTTATACTTAGGAGAAAAACCATTTTCTTTTTTGTTACTATTACTTATTAATTAGGTTAAAAGTTGTTAGATTGTCGTTTAAGGGAATGGATAAGAAAAAGGTAGCGGTTCCCCTTGTGTGTCACGGCCATTCCCGGCCGGTAGTGGATCTGTTTTACAGTCCTGTTACGCCTGATGGTTTCTTCCTCATCAGCGCAAGCAAGGATTCTAATCCCATGCTCAGAAATGGACAGACTGGAGATTGGATTGGAACATTTGAAGGACACAAAGGTGCAGTGTGGAGTTGCTGCTTGGATACTAATGCTTTACGTGCTGCAACTGCTTCTGCTGACTTCTCATCGAAAGTTTGGGATGCATTAACAGGAGATGAATTACACTCATTTGAACATAAGCACATTGTTCGAGCATGTGCTTTTTCAGAGGATACACACCTTTTACTCACTGGGGGAATGGAGAAAATACTTCGGATCTATGATTTAAATCGCCCTGATGCACCACCCAGAGAAGTAGATAAATCCCCTGGATCGGTCAGAACTGTTGCTTGGCTTCACAGTGACCAGACAATATTGAGTTCTTGTACTGATATGGGAGGTGTCAGGTTATGGGATGTGAGAAGTGGTAAAATAGTCCAAACATTAGAGACCAAGTCCTCAGTGACCAGTGCTGAAGTGAGTCGAGATGGTCGTTATATCACAATTGCTGATGGTTCTACTGTTAAGTTTTGGGATGCAAATCACTATGGATTGGTGAAGAGCCATGATATGCCCTGTACCGTGGAATCAGCTTCATTGGAACCAAAGAATGGGAATAAGTTTGTTGCTGGGGGAGAGGACATGTGGGTTCGTGTTTTTGATTTTCATACTGGCGATGAGATTGCATGCAACAAGGGCCACCATGGGCCTGTACACTGCGTCCGTTTCTCCCCTGGAGGAGAATCATATACCTCGGGATCCGAGGATGGAACCATCAGAATATGGCAAACAGGCCTTTCGATCAATGACGAATCAGAGTCAAATGGTTCAATTGCTAAGGTGAAGGTAACGGTAGAAGAGGCTTCGCGCAAGATTGAGGGTTTTCATATTGCAGATGAAGGGAAATCCAAAGAAAAGGGAGAGGCAGAGGAGGAATAACGATGCTAATAATTGTGCTCGTTTTGTCTGGATGAGTGTTACCATATCCTAAACAGAGCCTGATACACACATAATTAGTAAACCAACTTTTTGTAAATTTTACTTTCTATGGACTCATATCCTGGACTCCTGGTTGCTGTTACGCCCATTTCAACTCATTTATTGTGGCGGTTTATTTAAGGGATATGGGAAATGACTTGGTATTCATATTGGAGAAGCCTAGAACATTGAAGCAGCTTGGATCGATAAATGGCTGCCAAGTCGCCGTTGTTAGATGGAAGTGCTGAATAAAGCTAGGGAGGGAGGATTCATGATGTTTTTGTATGCCCTTCCGTTTCATCAAAAATGGATAGACCTTCGTGTTTAATTTAAGAGTTT 1790 0.4179 MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSNPMLRNGQTGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSSKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGMEKILRIYDLNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDMGGVRLWDVRSGKIVQTLETKSSVTSAEVSRDGRYITIADGSTVKFWDANHYGLVKSHDMPCTVESASLEPKNGNKFVAGGEDMWVRVFDFHTGDEIACNKGHHGPVHCVRFSPGGESYTSGSEDGTIRIWQTGLSINDESESNGSIAKVKVTVEEASRKIEGFHIADEGKSKEKGEAEEE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00553 347 FunFam Serine-threonine kinase receptor-associated protein 8 324 - -
Bach5g00553 347 SUPERFAMILY WD40 repeat-like 4 299 IPR036322 GO:0005515
Bach5g00553 347 SMART WD40_4 92 130 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 50 89 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 217 256 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 134 174 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 177 214 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 259 298 IPR001680 GO:0005515
Bach5g00553 347 SMART WD40_4 5 47 IPR001680 GO:0005515
Bach5g00553 347 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 7 338 - -
Bach5g00553 347 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
Bach5g00553 347 Gene3D - 9 323 IPR015943 GO:0005515
Bach5g00553 347 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Bach5g00553 347 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Bach5g00553 347 Pfam WD domain, G-beta repeat 266 297 IPR001680 GO:0005515
Bach5g00553 347 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Bach5g00553 347 CDD WD40 14 298 - -
Bach5g00553 347 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Bach5g00553 347 ProSiteProfiles Trp-Asp (WD) repeats profile. 98 132 IPR001680 GO:0005515
Bach5g00553 347 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00553 Bach-Chr5 3779045 3783443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00553 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 28.221 6.56e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00553 K13137 - qsu:111987820 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00553 5 3779045 3783443 Bach5g00553 5 3779045 3783443 ECH