Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00547 ATGGGCTCCTATGATTCTTCCTCCCCCTCCGCAACTAGAACCATGACGGACATCGACGGTCTCCTCGCCGGAGCCGGCTACAAGGTTAGGTCCTCTGATCTTCATCAAGTTGCCAGACGCCTCGAACGCCTTGAGAACGTCATGGTTAACTCCGCCGCCGACATTTCTCAACTAGCTTCCGATACCGTACACTACGACCCCTCGGACATCGCATCCTGGATTGACAGCCTCCTCTCCGAGTTAAACCACAACGTTTCTCTACCCTCTGATCTTATGGAATTGTCTGATCTCCCCACAGGTCCCCCTCTCGATCAAACGGTTCTTGATACCGACTGGATAAATCATAAAAATATATTGCCTCAGCATCAGCACCACCGTAATACTGCTCAGCAACACCAGCACCAGCAATTGACGGTGGTACCATCCATGGAAGAAGACTCTGGGATAAGGCTGGTCCACATGCTCATGACATGCGCCGATTCTCTGCAACGTGGCGAGCTAGCACTCGCTGGCTCATTGATCGAGGACATGCAGGCCTTGTTGGCGCATGTAAACACCGCCTGTGGTATCGGGAAAGTCGCCGGTTACTTCATCGATGCGCTAAGTCGCCGGATCTTTGCACCCCACCAGATTCAGGGCATTGTCTCCTGCACTGGTTCACCTTTCGATAACGAGGTTCTGTGCCATCACTATTACGAAGCTTGTCCCTACTTCAAATTCGCCCACTTCACCGCCAACCAGGCTATCCTTGAAGCTTTCAACGGTCACGATTCTGTCCACGTCATTGACTTCAACCTCATGCACGGCTTGCAGTGGCCGGCTCTCATACAGGCTCTGGCACTGCGTCCCGGTGGCCCCCCCTTGTTGCGGTTGACTGGCATTGGCCCACCCTCACCCGACGGTCGTGATACTTTACGGGAAATCGGTCTGCGACTCGCCGAGTTAGCCCGTTCCGTCAATGTTAGATTCGCATTTCGCGGCGTCGCGGCTTCCAGACTCGAGGACGTGAAGCCATGGATGCTCCAGGTCAGTCCAAAAGAAGCTGTGGCGGTCAACTCCATCATGCAGCTCCACAAACTTCTCGGGTCTGACTCAGGCTTAGGCTCAGGCTCAGCAATCGAAGTGGTCCTTGGATGGATCCTAAGCCTCAACCCGAAAATCATGACCCTGGTGGAGCAAGAAGCAAACCATAACCAACCCGGATTCTTTGATCGCTTCACGGAATCTCTCTATTATTACTCAACCATGTTTGATTCGCTAGAGGCTTGCTCGCTCCAGCCGGATAAAGCTTTCGCCGAGATGTACATACAAAGGGAGATATGCAACGTGTTGTGTTGCGAGGGATCGGCTCGGGTGGAGAGACACGAACCACTGTCAAAATGGAGGGATCGGTTAGGAAAAGCCGGCTTTAAACCTCTGCGATTGGGGTCGAATGCGTTCAAGCAGGCGAGCATGCTGTTAACTCTGTTCTCGGCGGAGGGTTATTGTGTGGAAGAGAACGAAGGGTGCTTGACGTTAGGGTGGCATAGCCGTCCTCTGATCACGGCTTCGGCTTGGCAAGCCGTGTCAGAGACAAACGCTGCGTTTGAAGCCGTAACAAGCGGTTCCTTGATGTAA 1617 0.5331 MGSYDSSSPSATRTMTDIDGLLAGAGYKVRSSDLHQVARRLERLENVMVNSAADISQLASDTVHYDPSDIASWIDSLLSELNHNVSLPSDLMELSDLPTGPPLDQTVLDTDWINHKNILPQHQHHRNTAQQHQHQQLTVVPSMEEDSGIRLVHMLMTCADSLQRGELALAGSLIEDMQALLAHVNTACGIGKVAGYFIDALSRRIFAPHQIQGIVSCTGSPFDNEVLCHHYYEACPYFKFAHFTANQAILEAFNGHDSVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDTLREIGLRLAELARSVNVRFAFRGVAASRLEDVKPWMLQVSPKEAVAVNSIMQLHKLLGSDSGLGSGSAIEVVLGWILSLNPKIMTLVEQEANHNQPGFFDRFTESLYYYSTMFDSLEACSLQPDKAFAEMYIQREICNVLCCEGSARVERHEPLSKWRDRLGKAGFKPLRLGSNAFKQASMLLTLFSAEGYCVEENEGCLTLGWHSRPLITASAWQAVSETNAAFEAVTSGSLM 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00547 538 FunFam DELLA protein GAI 17 81 - -
Bach5g00547 538 Gene3D - 17 81 IPR038088 -
Bach5g00547 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 131 516 IPR005202 -
Bach5g00547 538 Pfam Transcriptional regulator DELLA protein N terminal 19 84 IPR021914 -
Bach5g00547 538 ProSiteProfiles GRAS family profile. 142 520 IPR005202 -
Bach5g00547 538 Pfam GRAS domain family 151 520 IPR005202 -
Bach5g00547 538 SMART DELLA_2 19 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00547 Bach-Chr5 3757592 3759208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00547 18 520 GRAS Transcription Factor Family AT1G14920 48.851 7.71e-164 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bach5g00547 GRAS 1.5e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00547 K14494 - qsa:O6P43_002319 771.541