Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00542 ATGGCGGTGGTTTTTGCCACTTGGAGAGTGATGATTCTGGTCTTCATTTTGGTTCTGCAACTGAGTTGGCGAGTCAGAATGGAGCCGACCCAGGACAAGCAAGCCCTCCTTGCTTTCATCTCTCAAACTCCACATGCTAATCGTATTCAGTGGAACGAATCCGACTCAGCCTGCAACTGGGTGGGAGTGGAATGCGATGCTGCACGTTCCTTTGTTTATTCTCTTCGTCTTCCTGGAGTTGGCCTTGTTGGTCGGATTCCACCGAACACAATCGGCAGTCTCACTCAAATACGAGTTCTCAGTCTCCGTTCTAACGGTCTTATCGGTGAGATCCCCGCCGATTTCTCCAATTTGACGTTGCTTCGCAGCCTCTACCTCCAGGATAACCAGTTCTCCGGCGAGTTCCCCACCTCACTGACTCGGTTGTCCCGTTTGACACGGCTAGATCTTTCTTCAAACAACTTTACGGGTAGAGTGCCTTTCTCCATCAACAATTTGACCCACTTGAGCGGTCTTTTCTTGGAAAATAATAGATTCTCAGGTAACCTGCCAAGCATTACAGCCAATTTGGCAAACTTCAATGTCTCCAATAACCAGCTTAATGGTTCGATTCCTCAAACCCTTTCGAAATTCCCTGCATCCTCATTCGCTGGAAATTTAGATCTCTGTGGAGCACCATTGCAATCATGCACCCCATTCTTTCCAGCTCCAGCTTCATCACCGTCCACTGATGTACCCATAGCCCCAGTTCAAAAGAAGTCCAAGAAGCTTTCAACAGCTGCCATTATCGGGATTGCAGTTGGTTCTGCTCTGTTTCTCTTGTTATTACTGCTTCTTCTCTTTCTATGCCTCCGGAAGCGCCAGCGTCGTGTACCGGCAAAGCCGCCGAAGCCAGTGGCCACAGCTCGCGCTGTACCAGCGGAGGCTGGCACCTCATCTTCGAAAGATGATATCACGGGTGGGTCTGTGGAGGCCGAGAGGAACAAGCTAGTGTTCTTCGAAGGTGGAATATATAGTTTCGATTTGGAGGATTTGCTGAGGGCTTCTGCGGAAGTTTTGGGGAAGGGAAGCGTTGGCACTTCTTATAAGGCCGTATTGGAGGAAGGGACAACGGTGGTGGTGAAGAGGTTGAAGGATGTAGCTGTTCAGAAGAGAGAGTTCGAGACGCAAATGGAGGTTCTGGGAAAGATTAAGCACGAGAATGTGGTTCCTCTTAGAGCATTTTACTACTCTAAGGATGAGAAATTGCTAGTTTACGATTACATGTCTTCTGGAAGCTTGTCTGCTCTGCTTCACGGCAGCAGGGGGTCAGGGCGGACGCCACTGGACTGGGATAACCGGATGAGAATAGCGCTAGGAGCCGCAAGAGGTCTGGCCTACCTACACGTGTCCCGAAATGTGGTCCATGGCAATATAAAATCTTCCAACTTACTCCTCAGATCTGACCACGAAGCTAGCGTTTCGGACTTCGGGCTGAACCCATTATTTGGCAATTCGACCCCATCCAACCGGGTGGTGGGCTATCGGGCCCCCGAGGTTCTGGAAACTCGCAAAGTGACCTTCAAGTCTGACGTGTACAGCTTCGGTGTGTTGCTATTGGAGCTTCTAACAGGGAAGGCGCCCAATCAAGCTTCATTGGGTGAAGAGGGAATTGATCTACCGAGGTGGGTCCAATCCGTGGTTCGTGAAGAATGGACGGCTGAGGTGTTCGACGCAGAGCTTATGAGGTATCACAACATTGAGGAAGAGATGGTTCAGCTATTGCAGGTAGCGATGACGTGTGTTTCGGTGGTACCTGATCAGAGACCAAGCATGCAAGAAGTGGTGCGTATGATTGAGGATATGAACAGAGGCGAGACGGATGATGGCTTACGACAGTCATCCGATGATCCATCGAAAGGATCGGACGGCCATACGCCACCTGCTGAGTCGAGGACTCCACCAAGCTCCGTCACACCTTAA 1962 0.5031 MAVVFATWRVMILVFILVLQLSWRVRMEPTQDKQALLAFISQTPHANRIQWNESDSACNWVGVECDAARSFVYSLRLPGVGLVGRIPPNTIGSLTQIRVLSLRSNGLIGEIPADFSNLTLLRSLYLQDNQFSGEFPTSLTRLSRLTRLDLSSNNFTGRVPFSINNLTHLSGLFLENNRFSGNLPSITANLANFNVSNNQLNGSIPQTLSKFPASSFAGNLDLCGAPLQSCTPFFPAPASSPSTDVPIAPVQKKSKKLSTAAIIGIAVGSALFLLLLLLLLFLCLRKRQRRVPAKPPKPVATARAVPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVAVQKREFETQMEVLGKIKHENVVPLRAFYYSKDEKLLVYDYMSSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLAYLHVSRNVVHGNIKSSNLLLRSDHEASVSDFGLNPLFGNSTPSNRVVGYRAPEVLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQVAMTCVSVVPDQRPSMQEVVRMIEDMNRGETDDGLRQSSDDPSKGSDGHTPPAESRTPPSSVTP 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00542 653 Gene3D Transferase(Phosphotransferase) domain 1 422 633 - -
Bach5g00542 653 Pfam Protein kinase domain 350 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00542 653 MobiDBLite consensus disorder prediction 614 632 - -
Bach5g00542 653 PANTHER OS05G0588300 PROTEIN 10 625 - -
Bach5g00542 653 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Bach5g00542 653 CDD STKc_IRAK 353 615 - -
Bach5g00542 653 MobiDBLite consensus disorder prediction 614 653 - -
Bach5g00542 653 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
Bach5g00542 653 FunFam pollen receptor-like kinase 1 317 421 - -
Bach5g00542 653 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 422 626 - -
Bach5g00542 653 Pfam Leucine rich repeat 83 131 IPR001611 GO:0005515
Bach5g00542 653 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Bach5g00542 653 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Bach5g00542 653 SUPERFAMILY L domain-like 40 228 - -
Bach5g00542 653 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Bach5g00542 653 ProSiteProfiles Protein kinase domain profile. 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00542 653 MobiDBLite consensus disorder prediction 293 320 - -
Bach5g00542 653 SUPERFAMILY Protein kinase-like (PK-like) 351 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00542 Bach-Chr5 3724689 3727592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00542 32 636 Receptor kinase-like Gene Family AT5G58300 53.821 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach5g00542 Pkinase 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00542 - - qsa:O6P43_023032 1014.22