Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00533 ATGTCATCAGGTGCAAGTGAAACCCTTTGGAGCTATGAAGAAGAGAAGGCGTTTGAGAATGCCATCGCCACGCATTGGATTGATGAAGACTCAAAGGAGCAATGGGAAAAGATTGCTTCAGCAGTTCCCAACAAAAGTATGGAGGAAGTGAAGCGACATTACCAGTTGCTAGTAGAGGATGTAAGTGCCATAGAGGGAGGGCATATACAGCTTCCCAACTATGTTGGAGAGGAAACTACATCTTCAAACAAAGATTCTCACGGTTCTTCCAAGGCTTCAGCTACAGATAAGAGATCCAACTGCAATTATGGAAGTGGGTTTTCAGGGATAGGACATGATTCCACTGGTAAAGGAAGCTTGTCAAGGTCTTCAGAGCAAGAAAGGCGAAAAGGGATTCCATGGACAGAAGAAGAGCATAGGCTATTTCTACTTGGTCTTGACAAGTTTGGGAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATTTCTAGGACTCCAACTCAAGTGGCAAGCCATGCTCAGAAGTACTTTATTCGATTAAACTCAATGAATAGAGATAGAAGGAGATCTAGTATCCATGACATTACAAGTGTGAACAATGGAGATGTGGCTGGTAATCAGGCACCAATTACAGGGCAACATGGCAGCACAAACCCATCAAACACCATTGCTGTAGGACAATCGATGAAGCATAGAACTCAACCACATATGGCTCCTGGTTTAGGCATGTATGCCACTCCCATGGGCCATCCAGTGGCTGCTCCTCCGGGGCATATGGCATCTGCTGTTGGAACTCCTGTCATGCTCCCACATGGGCCTCATCCCCCCTATGTTCTCCCACTTGCTTACCCAATGGCACCTCCAACAATGCACCAATAG 882 0.458 MSSGASETLWSYEEEKAFENAIATHWIDEDSKEQWEKIASAVPNKSMEEVKRHYQLLVEDVSAIEGGHIQLPNYVGEETTSSNKDSHGSSKASATDKRSNCNYGSGFSGIGHDSTGKGSLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVAGNQAPITGQHGSTNPSNTIAVGQSMKHRTQPHMAPGLGMYATPMGHPVAAPPGHMASAVGTPVMLPHGPHPPYVLPLAYPMAPPTMHQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00533 293 CDD SANT 133 178 IPR001005 -
Bach5g00533 293 FunFam Transcription factor SRM1 2 71 - -
Bach5g00533 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 182 IPR017930 -
Bach5g00533 293 Pfam Myb-like DNA-binding domain 133 178 IPR001005 -
Bach5g00533 293 Pfam Myb-like DNA-binding domain 10 56 IPR001005 -
Bach5g00533 293 SUPERFAMILY Homeodomain-like 10 64 IPR009057 -
Bach5g00533 293 Gene3D - 132 184 - -
Bach5g00533 293 ProSiteProfiles Myb-like domain profile. 126 178 IPR001005 -
Bach5g00533 293 SMART sant 6 60 IPR001005 -
Bach5g00533 293 SMART sant 130 180 IPR001005 -
Bach5g00533 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 130 180 IPR006447 GO:0003677
Bach5g00533 293 PANTHER TRANSCRIPTION FACTOR KUA1 6 281 - -
Bach5g00533 293 FunFam transcription factor MYB1R1 132 183 - -
Bach5g00533 293 SUPERFAMILY Homeodomain-like 128 183 IPR009057 -
Bach5g00533 293 CDD SANT 10 58 IPR001005 -
Bach5g00533 293 ProSiteProfiles SANT domain profile. 134 182 IPR017884 -
Bach5g00533 293 MobiDBLite consensus disorder prediction 74 121 - -
Bach5g00533 293 MobiDBLite consensus disorder prediction 74 131 - -
Bach5g00533 293 Gene3D - 2 71 - -
Bach5g00533 293 ProSiteProfiles Myb-like domain profile. 2 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00533 Bach-Chr5 3640530 3641600 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g00533 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00533 - - gmx:778049 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00533 5 3640530 3641600 Bach5g00533 5 3640530 3641600 ECH