Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00530 ATGTATCCCTCAAACAGTTCCCTCAACGGTAATGACCCAATTTCCTACTATGACCAAGCATTTTGCTGCAGGCCTATTTTCTATGACAGCAACCCAAATTCCAAACAAGATAATGCTGCTCATGCCCCTATTTCTCCTCCTCCTCCTCCTGTTCCTCCTGCCTGTTCTTCTCTACTCCACTTCCCTTCTCCCTTTGAAGACGATGAATTTTTTCTCCAACAAAATTATGACCTCTTGCTTCACCATCAATCTCTATCCGATGCTGTTCTTGGCATGGAGGTTTCAACCAAGATTCCTAGTAAGGGACATAGCGTGAGTACGGAGCAGATGCCAAGAAAAAGACGATCTTGCAAGAGAGATCGACACAGCAAGATTAATACAGCTCGGGGACTAAGGGATCGGAGAATGAGGCTGTCCCTTGAAGTTGCTAAAAGATTTTTTGGTCTACAAGACATGCTAGGTTTTGACAAAGCAAGCAAAACGGTGGAGTGGTTACTTACTCAAGCAAAGGACAAAATCAAACACCTAGCAAGAGAGAAGAATCACCACAGCTGTAGTAGTATTGCTGGAGTGAAGAGTGCATCTTCAACTTCAGAATGTGAAGGGGTATCTGGCTTGGATGAGGTTGCAGTCAGTGGAAATGGAGAACAAGAAGGGGAACCCTCGGTGAGGAAAAGGATTAAACACTCTCGAAAGAGTGCATTCCGTCCTGTTGCTAGAGAATCAAGGGAAAAAGCAAGAGAAAGGGCAAGAGAAAGGACAAAGGAAAAGTTGAGGAGTAGGAGACTAGCTGATGAATCAAAGTCAAAGCAATGCAACGACGAAAAAACCAATAGTCTGAACCGATTGAGTTCATGGAATCCCTTTGAAACGAGAGAGGAATCTCGTACCCAGAGTCAAAACGTGAATCTCTCCTTGGATCAGCTGACAGGGGCCGAAGAGTTGAGTTCTCATCAGGCAAAGGTGCATTTGGGGACTGTAGATGATATGGTTCATGATGATTCTTTGTTGATTATGAGCAAATGGAGCCCATCAATGATTTTCAATTCACTGACTAACTCTGGATTCCTACCACATCAGTTTGCAGAATTCCAGTCCTTGGGCAAACCTTGGGAGGCCTACAACAGTCACATCTAA 1137 0.4424 MYPSNSSLNGNDPISYYDQAFCCRPIFYDSNPNSKQDNAAHAPISPPPPPVPPACSSLLHFPSPFEDDEFFLQQNYDLLLHHQSLSDAVLGMEVSTKIPSKGHSVSTEQMPRKRRSCKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLTQAKDKIKHLAREKNHHSCSSIAGVKSASSTSECEGVSGLDEVAVSGNGEQEGEPSVRKRIKHSRKSAFRPVARESREKARERARERTKEKLRSRRLADESKSKQCNDEKTNSLNRLSSWNPFETREESRTQSQNVNLSLDQLTGAEELSSHQAKVHLGTVDDMVHDDSLLIMSKWSPSMIFNSLTNSGFLPHQFAEFQSLGKPWEAYNSHI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00530 378 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 373 IPR005333 GO:0003700
Bach5g00530 378 ProSiteProfiles R domain profile. 240 257 IPR017888 -
Bach5g00530 378 MobiDBLite consensus disorder prediction 99 118 - -
Bach5g00530 378 MobiDBLite consensus disorder prediction 234 275 - -
Bach5g00530 378 MobiDBLite consensus disorder prediction 276 300 - -
Bach5g00530 378 Pfam TCP family transcription factor 118 260 IPR017887 -
Bach5g00530 378 ProSiteProfiles TCP domain profile. 118 176 IPR017887 -
Bach5g00530 378 MobiDBLite consensus disorder prediction 208 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00530 Bach-Chr5 3607934 3609249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00530 105 254 TCP Transcription Factor Family AT3G18550 44.118 5.04e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bach5g00530 TCP 3.1e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00530 - - gmx:100803669 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach8g02454 8 30447267 30448574 Bach5g00530 5 3607934 3609249 ECH
Bach2g01892 2 26852017 26853297 Bach5g00530 5 3607934 3609249 ECH
Bach5g00530 5 3607934 3609249 Bach5g00530 5 3607934 3609249 ECH