Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00520 ATGGTCAAACCAGAAGACAATCATCATATCACGCATGAGGGCGAAACTGAGAAGAAGAAGAGCAAAAGAAAAAGAACACGTAAAACTGCAACTGCGGAGCAATCTGATCCTCAAGAGGCTGACGAGCGTGCAGTGGAAGAAGATGGTGAAGCAGAAGAGAATGGCCACGGGGAAGGAGAATCTGTGGAGGAAAATAAAAAGGATAAGAAGAAGCATAAGAAGGTGAAGAATGGGCAAGGAGAAAGTGAAGGTGAAAAGCACGGCGATGATAATGATGAGAACCAAGAGGAGGAAGACGAACAGAAAAAGGTGAAGAGGGTGGAGTCTGGCATTATGAGCTCTGTGTCATTTGATTCTGAAGATCTGAAATTGTCCGGGCCTACTTTGAAGGCTATTAAGGAGATGGGATTCCAGCACATGACTCAGATTCAAGCGAGAGCAATTCCATCACTTCTAATGGGAAAAGATGTTCTTGGTGCCGCAAGAACAGGTTCTGGAAAAACTCTGGCGTTTTTAGTTCCAGCTGTTGAGCTATTATACCACATTCAATTTACTCCTCGCAATGGAGCGGGTGTCATAGTCATATGCCCTACCAGGGAGCTTGCAATACAGACACATGCTGTTGCAAAAGATCTGCTCAAGTATCACTCACAAACTCTCGGATTGGTTATTGGAGGTTCAGCCAGAAGAGGAGAAGCTGAACGAATTGTTAAAGGGGTAAATCTATTAGTAGCAACTCCTGGTCGTCTTCTTGATCACCTCCAAAATACTAAGGGATTTATATATAAAAACTTAAAGTGCCTGATGATTGATGAAGCTGACAGGATATTGGAAGCAAACTTTGAAGAGGAAATGAAACAGATTATTAAGATCCTACCAAAGAACAGGCAAACAGCTTTATTTTCGGCTACCCAAACAAAGAAGGTTGAGGATCTTGCCCGCTTGTCATTTCAGACAAAACCTGTATATATTGGTGTGGATGATGACAGGAACAAGGTCACAAATGAAGGATTGCAGCAAGGCTATGTTGTTGTTCCCAGTGCGAAGAAATTTGTTGTTCTCTATTCTTTCTTGAAGAGATATCACTCAAAAAAAGTGATGGTCTTTTTCTCTTCCTGCAACTCTGTCAAATTCCATGCAGAACTTCTCAATTACATACAAGTGGCATGCTTTGACATTCATGGAAAACAAAAGCAACAGAGAAGGACTAATACTTTCTTCGAATTCTGCAAAGCAGAAAAAGGAATCCTGCTTTGTACTGATGTTGCTGCTCGTGGGCTTGATATACCTGCTGTGGACTGGATTGTGCAGTATGATCCTCCTGATGACCCCAAGGAATATATACATAGGGTTGGTCGGACAGCTCGTGGAGAAGGTGGAAAAGGAAATGCTTTGCTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGCTATCTGAAGGCAGCAAAGGTTCCTGTGAAAGAATATGCGTTTGAAGAAAAGAAGCTGGCAAATGTTCAGTCTCAGCTGGAAAAGTTGGTGGGTAACAATTATAATTTGAACCACTCGGCTAAAGAAGCTTACAGATCATACATATTAGCCTATAATTCACACTCTATGAAGGATATATTTAATGTTCACCACCTTGATCTACAGGCTGTTGCTGCTTCATTCTGCTTTTCAAACCCACCAAAGGTGAATCTGAACATAAATAGCACTGCTTCAAAGATTAGGAAGAAAATGCGTAAAATTGATGGAAAAAGACATGGATTTAGCGAGAGCAATCCTTATGGAAAGCGAAATGACGATGATAAGCGGCAATTTGTGAGGCATTAACAGGAGACATGTCGTGGCCTTGGGCAGTGGATATAATCCCCATCCCTTTCCCCACACCAACAATTTTGTTAGAATCTCAATTGTTTGGATGAATTTTGTAACATTTAATTTGTTCAAGTGGTTTTCAGAAATCTTTTGTTCTATTGGAAATCGGTTTACA 1975 0.4106 MVKPEDNHHITHEGETEKKKSKRKRTRKTATAEQSDPQEADERAVEEDGEAEENGHGEGESVEENKKDKKKHKKVKNGQGESEGEKHGDDNDENQEEEDEQKKVKRVESGIMSSVSFDSEDLKLSGPTLKAIKEMGFQHMTQIQARAIPSLLMGKDVLGAARTGSGKTLAFLVPAVELLYHIQFTPRNGAGVIVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKILPKNRQTALFSATQTKKVEDLARLSFQTKPVYIGVDDDRNKVTNEGLQQGYVVVPSAKKFVVLYSFLKRYHSKKVMVFFSSCNSVKFHAELLNYIQVACFDIHGKQKQQRRTNTFFEFCKAEKGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAFEEKKLANVQSQLEKLVGNNYNLNHSAKEAYRSYILAYNSHSMKDIFNVHHLDLQAVAASFCFSNPPKVNLNINSTASKIRKKMRKIDGKRHGFSESNPYGKRNDDDKRQFVRH 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00520 604 SMART DUF4217_3 498 561 IPR025313 -
Bach5g00520 604 Pfam Helicase conserved C-terminal domain 350 457 IPR001650 -
Bach5g00520 604 PANTHER RNA HELICASE 67 504 - -
Bach5g00520 604 MobiDBLite consensus disorder prediction 1 20 - -
Bach5g00520 604 Gene3D - 57 326 IPR027417 -
Bach5g00520 604 CDD DEADc_DDX18 128 325 IPR044773 GO:0003724|GO:0005524
Bach5g00520 604 MobiDBLite consensus disorder prediction 574 604 - -
Bach5g00520 604 Pfam Domain of unknown function (DUF4217) 499 559 IPR025313 -
Bach5g00520 604 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 148 323 IPR014001 -
Bach5g00520 604 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 117 145 IPR014014 GO:0003724
Bach5g00520 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 479 IPR027417 -
Bach5g00520 604 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 350 497 IPR001650 -
Bach5g00520 604 CDD SF2_C_DEAD 338 468 - -
Bach5g00520 604 Coils Coil 489 509 - -
Bach5g00520 604 SMART helicmild6 377 458 IPR001650 -
Bach5g00520 604 SMART ultradead3 136 341 IPR014001 -
Bach5g00520 604 FunFam RNA helicase 334 564 - -
Bach5g00520 604 Gene3D - 333 580 IPR027417 -
Bach5g00520 604 MobiDBLite consensus disorder prediction 1 107 - -
Bach5g00520 604 MobiDBLite consensus disorder prediction 75 89 - -
Bach5g00520 604 Pfam DEAD/DEAH box helicase 141 312 IPR011545 GO:0003676|GO:0005524
Bach5g00520 604 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 269 277 IPR000629 -
Bach5g00520 604 MobiDBLite consensus disorder prediction 40 54 - -
Bach5g00520 604 MobiDBLite consensus disorder prediction 579 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00520 Bach-Chr5 3528405 3532930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00520 99 477 Eukaryotic Initiation Factors Gene Family AT3G19760 28.684 1.74e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00520 K13179 - sind:105164333 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00520 5 3528405 3532930 Bach5g00520 5 3528405 3532930 ECH