Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00517 CTCGGTTCTTCAGTCGGTTGACTCGTTGTCTTTCTTCACGTAGACGGATTCAGGTTCATCTTCCTCGTCGATTCGACTCGGTGAATCTGTACGATGGAGCCGATGGACATCGTTGGAAAATCAAAGGAAGATGCTTCACTTCCAAAAGCAACTATGACGAAAATTATTAAAGAGATGTTACCCCCAGATGTACGTGTTGCAAGAGATGCTCAAGATCTATTGATCGAGTGCTGTGTAGAGTTTATAAACCTTGTCTCATCAGAGTCCAATGAAGTCTGTAGCAGAGAGGAGAAACGGACCATTGCACCTGAGCATGTATTGAAGGCTTTAGAGGTTCTTGGATTTGGTGAGTACATTGAGGAAGTTTATGCAGCATATGAACAGCACAAAATTGAGACTGTGCAGGACTCTTTAAAAGGTGGCAAGTGGAGCAATGGAGCTGAAATGACCGAGGAAGAAGCATTAGCAGAGCAGCAAAGGATGTTCGCCGAGGCACGTGCTAGAATGAACGGTGAGGCTATTCCTTCCAAGCAGCCGGATGCTGACCAAAGTTTAGGGAGCTAACTATATAGGATATTTGCTTTCTTGAAGCACAGGCAAAGCATCTCTGACTCTCCCGTCTATGCTTCTAAATAGCTCAATGGTGTACAAAAATCATTCACTAGTTCGCTGGCCCATGTGGATGCACTCTCGATTTGTATTCTACCTATGAATCCATATTTGTAAGTCAATGTAATTAGCGAGAGTTCATCCAAACCCTCCTCTATCTAGGATTACTTGTAATTATTCCATGTAGGCGTTCCATCTTCCTACCTGCTAACAGCTTTTTGGTTGGATTTTAATAATAGCGACTATATTAGAATGATGCAA 870 0.4287 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKIETVQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGEAIPSKQPDADQSLGS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00517 156 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
Bach5g00517 156 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Bach5g00517 156 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Bach5g00517 156 MobiDBLite consensus disorder prediction 137 156 - -
Bach5g00517 156 SUPERFAMILY Histone-fold 12 143 IPR009072 GO:0046982
Bach5g00517 156 FunFam Negative cofactor 2 beta 6 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00517 Bach-Chr5 3514977 3518566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00517 1 152 CCAAT-DR1 Transcription Factor Family AT5G23090 82.468 1.99e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bach5g00517 CBFD_NFYB_HMF 5.4e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00517 K21751 - jre:109017784 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00517 5 3514977 3518566 Bach5g00517 5 3514977 3518566 ECH