Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00514 ATGGAAAACCTAGAGACCTCAGAATCCCCATTCCAATCTCAAAACTCGTACAAAAATCACTCTTTTATGCCTCTTGAAGCAGATAAATCCTATGAGAACAAAGATAGGAAGATTATGAGATTTGGAAAAAGAGAAAATGGTGGGAGAAAGTTCCTTGGGGTGAGACAAAGACCTTCAGGAAGATGGGTTGCTGAGATCAAGGACTCCTCACAGAAGCTGAGGGTGTGGTTAGGAACTTTTGACAGAGCAGAAGAGGCTGCTCTGGCTTATGACTGTGCTGCAAGTCTTCTAAGAGGTAGAAATGCCAAAACAAATTTTCCAAGCAGTGGATTAGGCAAACCCCATGAAGAAAGTTGCAGCTTTTTGGGAAAGAATCCTAGAGCTTATCAGCTTCTTAAGCATGCAGTCATGAAGAACCATGCACCATCTGCATCTGTTTATTCCACAATCATGCCATGGAAACACCAGATCATGAGTGATGAATTCGACACGCTTGTTGAAGACACTATAGTTTGTTCTTCTAGCTCTGAGGAAGGGTCAGGGTGCAGTGGTATTTCATTTGGTAGTTCGAAGGTTTATTCTTCTGTTGTTGTAGCTCCTTCTTTCAGTTCTTCTGTGTCAAACAAGAAGTGA 633 0.4202 MENLETSESPFQSQNSYKNHSFMPLEADKSYENKDRKIMRFGKRENGGRKFLGVRQRPSGRWVAEIKDSSQKLRVWLGTFDRAEEAALAYDCAASLLRGRNAKTNFPSSGLGKPHEESCSFLGKNPRAYQLLKHAVMKNHAPSASVYSTIMPWKHQIMSDEFDTLVEDTIVCSSSSEEGSGCSGISFGSSKVYSSVVVAPSFSSSVSNKK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00514 210 MobiDBLite consensus disorder prediction 1 21 - -
Bach5g00514 210 FunFam ethylene-responsive transcription factor RAP2-11 49 108 - -
Bach5g00514 210 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 37 138 - -
Bach5g00514 210 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Bach5g00514 210 CDD AP2 50 109 IPR001471 GO:0003700|GO:0006355
Bach5g00514 210 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
Bach5g00514 210 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Bach5g00514 210 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Bach5g00514 210 MobiDBLite consensus disorder prediction 1 29 - -
Bach5g00514 210 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Bach5g00514 210 SUPERFAMILY DNA-binding domain 50 108 IPR016177 GO:0003677
Bach5g00514 210 Pfam AP2 domain 51 99 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00514 Bach-Chr5 3494482 3495114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00514 50 106 AP2-EREBP Transcription Factor Family AT5G19790 75.439 1.16e-25 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach5g00514 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00514 K09286 - gmx:100807374 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00514 5 3494482 3495114 Bach5g00514 5 3494482 3495114 ECH