Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00502 ATGACGTCGACAATGGCGGATGTCACCTTCATTCGCCTCCACGAACCTGATGACGACCCTCATCTTCTTGAGCCAACCCTAACTCTGGATTCTATCCCTTACTGTTTTCATCACGATTTCGATTTCTATGCTTCTGATCCAGATTTCCCACCATCTGATGCCCCTCTCCATCCCCACATCGCCTCTTCCGATGCTGCCTTGTCTGAACAATTCGAATCAACAATCTGTGTTCGAGATGAGGATGACTTCTCGGACCCTGGTTCGATTTCAAACGCCGATCTTTTAGACCGTGAAAACCAGGTAAATTTCGTTATGGATCTCTTTCAACAACGTGTTGAGCAATCGCAGGTCGTGGGCCATAGAGATTTTGTTTCGGATAATGAGTCGGGTTTTGGTGTTATTGACGGACACTGTGATGTTGGTGTTGATGTTTTGGGGCTGGATTTGGGGTTAGGTTTAGGATTTGGTGTCGAGAGGGATTGTGATGACATTTGTGGTTTCCTGGTTGAAAGATATGGTTCCGTTGGAGAGGCTGGCGATGATGATGATATCCTTATTGGAAGGAGGGTTTGTGGATCTGAACCCACTGAGGCACCGTTGACGGCAAGCGGGCTGCAACCTTTTGAGAACTGTGTCCGGCTTGTGGGATTTGGATTGGATTCGGATGAGGAGGAGAATGGGGCTTTGGGTCCCTATTTGCATTCGGAAGATGACTATAATGTGCACAATGAGAACGATGATGCTGCGAGCATCCCTCTTTGTTGGGATTCAATTCAGTTGGAGGATAACAGGGAGAGTAATGAAGATTTTGAGTGGGAGGAGGTGGATGGACGAGTTGACGAGAGGGAAGTTTTGAGCATGTTCATGGCTGAGGATGATAGGTCTGTTTCGGCTTCAATGTCGCCAGTAATTGGGCTTGAAGAAGTAGGTGTTGTGAGGGTTGGAGGCATGGAAAATTTGGAGTGGGAAGTGTTATTGAATGCCAATAATTTGGACACAAACCCTGATTTGGACCATGATGCAGAACCTTATTTTGATGATCATGATGATTATATATACACTGCAGAGAACGAAATGATGTTTGGGCAATTTACTGAGAATGAGAATCCCTTAATGGGTGGGCCTCCAGCGTCCCTATCTGTTGTTCAGCATCTTCCCTCAGTTGTTTTGACCAAGGAAGATGTAGAGAACAATAATGCACTTTGTGCAGTTTGTAAGGATGAATTCAATGTTGGGGAACAAGCAAAAGAGTTGCCATGCTCACATCGTTACCATGGTGACTGCATTATACCTTGGCTGCGTATCAGGAACACTTGCCCTGTCTGTCGATACGAGTTTCCAACAGATGATGCTGATTATGAGCGTAGGAGGAGCCAAAGATCTGGCCGTAGCTTGTGA 1398 0.4607 MTSTMADVTFIRLHEPDDDPHLLEPTLTLDSIPYCFHHDFDFYASDPDFPPSDAPLHPHIASSDAALSEQFESTICVRDEDDFSDPGSISNADLLDRENQVNFVMDLFQQRVEQSQVVGHRDFVSDNESGFGVIDGHCDVGVDVLGLDLGLGLGFGVERDCDDICGFLVERYGSVGEAGDDDDILIGRRVCGSEPTEAPLTASGLQPFENCVRLVGFGLDSDEEENGALGPYLHSEDDYNVHNENDDAASIPLCWDSIQLEDNRESNEDFEWEEVDGRVDEREVLSMFMAEDDRSVSASMSPVIGLEEVGVVRVGGMENLEWEVLLNANNLDTNPDLDHDAEPYFDDHDDYIYTAENEMMFGQFTENENPLMGGPPASLSVVQHLPSVVLTKEDVENNNALCAVCKDEFNVGEQAKELPCSHRYHGDCIIPWLRIRNTCPVCRYEFPTDDADYERRRSQRSGRSL 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00502 465 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 364 449 IPR013083 -
Bach5g00502 465 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 277 447 - -
Bach5g00502 465 FunFam E3 ubiquitin-protein ligase RING1-like 363 449 - -
Bach5g00502 465 SMART ring_2 402 442 IPR001841 -
Bach5g00502 465 Pfam Ring finger domain 402 443 IPR001841 -
Bach5g00502 465 SUPERFAMILY RING/U-box 382 449 - -
Bach5g00502 465 ProSiteProfiles Zinc finger RING-type profile. 402 443 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00502 Bach-Chr5 3431550 3432947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00502 322 457 C3H Transcription Factor Family AT5G15820 51.471 2.54e-39 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00502 - - pcin:129307991 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00502 5 3431550 3432947 Bach5g00502 5 3431550 3432947 ECH