Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00499 CGGGGGCGTGATTGGATCTGACAGCATCTGGTTCAGCTGCAACTTGTCAATCCCACTTTGCCCAACTCAATCTCATAATTTAGTTTCTGGAGGATATAGAATTCAGAATTCCATTGGATTACCGGGACGGGAAGCATTTACATCATTTGATGGAGCTTCCTCAAGCACGTCCCCTAGCAAGGAAACCGACGCATGATTTTCTGTCACTGTACAGTCATTCAACTGCCCAACAAGATCCAAGGCAACCTGCTCAAGGAAATTACCTGAAAACGCAGGATTTCCTGCAGCCACTGGAACAACGGATAGAAAGGAAAACGACTACTGCCAAGGAAGAAGCAGCCGACGACGAGATCTCACCGGTGGATCAAAAGCAACCACCAACATCTTCTATTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATTAGCCACATTTCGTTTTTGAATCATCCGAGAGTTCCAAAGCAAGAGGCAACGCCCCTTTTGACACAGCCACAGCCACAGCCTCAACCAACCAGTATTGACGAGCCTTCCAACTGCAGTTCTTATACCGGTGGAAGCGGTTTCACCTTGTGGGAAGACTCTGCAGCTAACAAGGGAAAGACAGGGAAGGAGAATGTCGTCGACAAACCCCTCAGTACTCCCGGATCAGCGGCAAGGGTAGAGCACTGGGCGTTGTCGGAACTAACGCCGCAGTCGTTTTCATACAATCGTCACAACAACTTCAATTCTCTCTCTTCTTCTCAGTCTCAGACATCTGGTCACAAGAGCCAGAGTTTTATGGACATGATCAAATCCGCCAAGCATTGTTCCCAGGACGACGAACTTGACAATGAAGAATCATTCATTCTCAAGAAAGAATCCTCCTATACTCCACCGACAGGGGATTTGAGAGTGAAAGTGGATGGGAAGAGGAGCCCAGATCAAATGCCAAACACACCACGATCAAAACATTCTGCGACAGAGCAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTAAGAGAGCTTATTCCACATAGTGACCAGAAGAGGGATAAGGCATCTTTTTTGTTAGAGGTTATTGAGTACATTCACTTTTTACAAGAGAAGGTGCACAAGTATGAAGGGTCCTACCAAGGGTGGAATCAAGAACCAGAAAAGTTGATGCCGTGGAGAAATAATCAAAGACGTGCTGAAAGTTATGTTGATCAATGCTGTGACACAAATGATGGGGCAAGTCCATCTCCAAAGTTGCTATTTGCTTCCAAGATTGATGAAAGAAATATTGCCTTCTCCCCAGCAATTCCTGGGAGTGCCCAGAGCAAAGAATCTGGCATGAGCACTGCAACTACCTTCAAGCCAATGGATCAACATCCTGGAATAACAAATAAGTCTATGCCAAGTCTCATCCCTTCACAGCTGAATTTCTTCACTCCAGCTCAAAGTGGTGGGCCAGGTGGAGTAGTGTCACAACACACGAACAGATTGGTATCTGATGCACAAAACAGCACATATCAACCTTCAATGCAATGTCAAACTTACTCTAATGCTGCTGATAAGCTGAAAGAGAAAGATCTCACCATTGAAGGTGGTGCCATTAACATATCAAGTGTCTACTCAAAAGGGTTGTTGGACACACTAACACAAGCACTTCAGAGTTCAGGAGTGGATTTATCACAGGCTAGCATCTCAATGCAAATTGAACTTGGTAAACAAGGAAACATCAGACCAGCGACACCAACACCAAGTGCTAAGGACGATGAGGTCCTTTCTAGCAAACAAGGGGTCGTGCGTCCTAGAGTTTCTGGCATTGAGATCTCTGATCAACCAGTAAAGAAGATAAAGACGACCAGAAAAGCTAATTTGACTGTGTCGTAATCATTCTTTCCTCATTCAAATTTTT 1896 0.4509 MELPQARPLARKPTHDFLSLYSHSTAQQDPRQPAQGNYLKTQDFLQPLEQRIERKTTTAKEEAADDEISPVDQKQPPTSSIEHILPGGIGTYSISHISFLNHPRVPKQEATPLLTQPQPQPQPTSIDEPSNCSSYTGGSGFTLWEDSAANKGKTGKENVVDKPLSTPGSAARVEHWALSELTPQSFSYNRHNNFNSLSSSQSQTSGHKSQSFMDMIKSAKHCSQDDELDNEESFILKKESSYTPPTGDLRVKVDGKRSPDQMPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSYQGWNQEPEKLMPWRNNQRRAESYVDQCCDTNDGASPSPKLLFASKIDERNIAFSPAIPGSAQSKESGMSTATTFKPMDQHPGITNKSMPSLIPSQLNFFTPAQSGGPGGVVSQHTNRLVSDAQNSTYQPSMQCQTYSNAADKLKEKDLTIEGGAINISSVYSKGLLDTLTQALQSSGVDLSQASISMQIELGKQGNIRPATPTPSAKDDEVLSSKQGVVRPRVSGIEISDQPVKKIKTTRKANLTVS 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00499 573 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 11 564 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bach5g00499 573 FunFam BHLH domain class transcription factor 263 335 - -
Bach5g00499 573 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 265 315 IPR011598 GO:0046983
Bach5g00499 573 CDD bHLH_AtBIM_like 264 340 - -
Bach5g00499 573 MobiDBLite consensus disorder prediction 125 139 - -
Bach5g00499 573 MobiDBLite consensus disorder prediction 47 69 - -
Bach5g00499 573 MobiDBLite consensus disorder prediction 113 139 - -
Bach5g00499 573 MobiDBLite consensus disorder prediction 18 44 - -
Bach5g00499 573 Gene3D - 263 337 IPR036638 GO:0046983
Bach5g00499 573 SMART finulus 271 321 IPR011598 GO:0046983
Bach5g00499 573 MobiDBLite consensus disorder prediction 1 80 - -
Bach5g00499 573 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 265 338 IPR036638 GO:0046983
Bach5g00499 573 Pfam Helix-loop-helix DNA-binding domain 267 316 IPR011598 GO:0046983
Bach5g00499 573 MobiDBLite consensus disorder prediction 236 280 - -
Bach5g00499 573 MobiDBLite consensus disorder prediction 521 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00499 Bach-Chr5 3404277 3408964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00499 1 564 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 45.101 4.35e-112 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00499 HLH 5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00499 - - gmx:100808016 658.292