Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00488 ATGGACTCTTGGAGTTATGTTTCTGATGAGAAAGGTTTTGTGTCCAGTGATACACTTTCGCCACCTAATACGCTATCCAGAAGCAAAAGTTCCTTCTTGGGTTGGGACTTGAAAACCCCTTGTAGCTTTGACAACGATATGTTAGCCTCGGGTCAACAAAACATTGAGAATCAAGGTTTTGAGGAATTGGGTTTTCCAGAATTGTTGGGTAAACAGTTGTCCGATGATCCGATTGCCGGTTTTCCTAGCAGAAAGCTGGATGGCGGTCCTGTCGGAAGAACCATTATGGGTGCTCCAAACGGGTATTGTGGGGGAGAAGACTCCAATTCGAAGCTGTCAAACTCTGGGGTTGACTCAAATAGTCGTGACCCGCTCATTGATTTGAAGCTGGGACGATTTGCTGATCACAGAGATGCTCATGATTCGACATATTCCAAAGGAACCCCCATTTTGTCTTCATCTGAATCATCCACAGCACCCAAAAGAGTGCGAGCTTCAGGGACACAGTCGCAAACTGCCTTCTGCCAAGTCTATGGCTGCAACAAGGATCTGAGTGTCTGTAAAGACTACCACAAGAGGCACAAAGTTTGTGAGGTTCACTCCAAGACTTCAGAAGTTATAGTGAACGGTATCGAACAAAGGTTTTGCCAACAATGTAGCAGGTTCCATTTGCTGGCTGAATTTGACGATGGTAAGCGCAGCTGTCGTAAACGCCTTGCAGGCCACAACGAGCGTCGAAGAAAGCCCCAAGTGAACATTCACTCTGCAAAGGCCGGGAGGTTGCTTCAGCCATATAGTGATGGCAGACTCCAGGGGACTATGCTAACAACAGCATCATTTATTTGTCAAGAGATACTCCCTAGTGGGGTTTTGCGTTCTGAGAAATACGGAACCAATGACTGGTGGAGACCTATAAAAGTTGAAGATGGGACTGATTACAGGAACCTTTCTGCTATTCCAGTCACAAATGGGCATACACAATCAAGATCTCTATTTCCTCCATATGGTGTTGAGAAACAATTTCCTTTTCTTCATGAAAATAGTGCCACAACAACTGCAGGAAGCATCTTCTGTGAAAACAATAGCCAATATCCACCAGCACTTGGTGGTCCAAATTCTGGTCCGCGATCATTATTTCAGGACACTTCCTTAGGCAGCGAGGACTTCAATGTTTTTGATACATCTTCAACTGTTCAAGGATTATCGAGAATTTCAGACGCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCATTCGTCAGGAATTCCCATAGCTCGCCCCTTGGTTATCCCAAGCAGCCATAGTAGCCATTACAGCATGAGTCAGGTATCTGAAAAGATCATAGGAATAAACTCACAGTCACAGGATTCTAGAAGTGGGGTGTCTGTGTCAGTTAGGTTTCCAACTGAAATGAATGCTGCTGGTGGGAGCCATCTTGGTCCTGTGTTGATATCAGACAGTAATGACATTGTCAACTTTGAAATGGCAGATGGGATTTTCCAAGGCTCAGATTTCATCAGGATGAAAGATCGTCTTTCTTGTGAAGATGGCCCTACTATTGACTTACTTCAGCTCTCATCACAGCTCCAGCGAGTTGAGCATCAGAGGCAATCCATGCAGGTCAAGCAAGAAAATGATTCTTCCTGCTCTCTCCGGATCACTTAA 1683 0.4516 MDSWSYVSDEKGFVSSDTLSPPNTLSRSKSSFLGWDLKTPCSFDNDMLASGQQNIENQGFEELGFPELLGKQLSDDPIAGFPSRKLDGGPVGRTIMGAPNGYCGGEDSNSKLSNSGVDSNSRDPLIDLKLGRFADHRDAHDSTYSKGTPILSSSESSTAPKRVRASGTQSQTAFCQVYGCNKDLSVCKDYHKRHKVCEVHSKTSEVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVNIHSAKAGRLLQPYSDGRLQGTMLTTASFICQEILPSGVLRSEKYGTNDWWRPIKVEDGTDYRNLSAIPVTNGHTQSRSLFPPYGVEKQFPFLHENSATTTAGSIFCENNSQYPPALGGPNSGPRSLFQDTSLGSEDFNVFDTSSTVQGLSRISDAGCALSLLSSQSQNSSSHSSGIPIARPLVIPSSHSSHYSMSQVSEKIIGINSQSQDSRSGVSVSVRFPTEMNAAGGSHLGPVLISDSNDIVNFEMADGIFQGSDFIRMKDRLSCEDGPTIDLLQLSSQLQRVEHQRQSMQVKQENDSSCSLRIT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00488 560 Gene3D - 165 236 IPR036893 GO:0003677|GO:0005634
Bach5g00488 560 MobiDBLite consensus disorder prediction 139 166 - -
Bach5g00488 560 Coils Coil 528 548 - -
Bach5g00488 560 FunFam Squamosa promoter-binding-like protein 14 166 236 - -
Bach5g00488 560 MobiDBLite consensus disorder prediction 106 120 - -
Bach5g00488 560 MobiDBLite consensus disorder prediction 145 166 - -
Bach5g00488 560 ProSiteProfiles Zinc finger SBP-type profile. 172 249 IPR004333 GO:0003677
Bach5g00488 560 MobiDBLite consensus disorder prediction 99 120 - -
Bach5g00488 560 Pfam SBP domain 175 248 IPR004333 GO:0003677
Bach5g00488 560 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 103 547 IPR044817 GO:0003677
Bach5g00488 560 MobiDBLite consensus disorder prediction 1 30 - -
Bach5g00488 560 SUPERFAMILY SBT domain 173 253 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00488 Bach-Chr5 3328578 3331958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00488 126 291 SBP-box Gene Family AT1G69170 54.819 1.55e-49 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach5g00488 SBP 1.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00488 - - gmx:100777766 781.941