Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00481 ATGCCAGGCTTTAGAAGTGAACGAGCTCCTCTATTGGAACGCAAAGAAGGGGGAAAGAGGGACGATGCCCCAAATCAACCGAGTGACCTTGAACACGGTGATGCAGTGCCGGCGGCTAATGTGGGATTCTCTAGAGTGTTTTCACTTGCAAAGCCTGATGCTGGGAAGTTGATAATTGCAACTTTGGCTCTGTTGGTTGCATCTACATCGAGTATCTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTCTCAGGAGATATTGAAACTCCTGAAGAAAAAGCTAGAGCGCTCGATGCTGTCAAAAACACCATACTAAGTATCTTTCTGATTGTTGTTGTTGGTTCAGTTTGCACAGCACTTCGAGCATGGCTTTTTTCTTCTGCTAGTGAAAGGGTTGTTGCTCGATTGAGAAAGAGACTGTTTGCACACCTAATACACCAGGAGATAGCCTTTTTTGATGTCACTCGAACTGGGGAACTTCTAAGTAGGCTGTCTGAAGATACACAGATCATAAAGAATGCAGCAACTACCAATCTTTCTGAGGCCCTGAGAAACCTATCAACTGCATTTATTGGTCTTGGCTTCATGTTTGCAACCTCATGGAAATTAACACTGTTGGCTCTGGCTGTTGTACCTGTTATTTCTGTTGCTGTACGAAAATTTGGTCGCTTCCTGCGAGAACTTTCTCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCTTCAATTGCTGAGGAATCCTTCGGTGCTATAAGAACAGTAAGATCTTTTGCTAAAGAAGAATACGAAATATCACAGTACTCTGAGAAAGTTGATGAGACACTTAAGCTTGGACTTAAACAAGCTAAAGTGGTTGGACTGTTTTTTGGTGGCCTTAATGCTGCGTCTACACTGTCAGTTATCGTAGTTGTCATATATGGAGCTAATTTAACAATAACGGGTTCCATGTCCGCTGGTGATCTTACATCTTTCATTCTCTATAGTCTCACAGTTGGTTCTTCTGTATCTGGTCTTTCATCATTGTACACAGTTGCTATGAAAGCTGCAGGTGCAAGCAGAAGGGTATTTCAACTTCTGGATCGTGAATGCTCCATGCCGAAGTCAGGAAATAAGTGTCCTTTGGGTGATCAAGATGGGGAAGTGGAACTTGATGATGTCTGGTTTTCCTATCCGTCACGTCCTGATCATACAATCCTAAAGGGTATTGCATTGAAACTGCAGCCTGGCTCAAAGGTTGCTCTTGTTGGTCCAAGCGGGGGTGGAAAGACTACAATAGCAAACTTAATTGAAAGATTTTATGACCCAACCAAGGGAAAGATTCTTCTGAATGGGGTTCCTCTAGTAGAAATATCACATGAACATCTACACAGTAAGATCAGCATAGTGAGTCAAGAGCCGATACTTTTCAACTGTTCCATAGAGGAGAACATAGCTTATGGAATTGACGGCAAGGTTGACGCTGTAGATGTAGAAAATGCATCTAAAATGGCCAATGCCCATGAATTTATATCGAAATTCCCAGAGAAATATCAGACCCATGTTGGAGAACGTGGGGTAAGGCTTTCAGGAGGGCAGAAACAGAGAATAGCAATTGCTAGAGCCCTGCTTATGAACCCAAGGATTCTCCTCCTGGATGAAGCTACTAGTGCTCTGGATGCTGAAAGCGAATACCTAGTACAAGATGCAATGGATTCGCTAATGAAGGGGAGAACAGTTCTAGTTATTGCTCACCGGCTATCAACTGTTAAAAGCGCTGATATTGTTGCAGTTGTTTCTGACGGTCAAATAGTTGAGCGTGGAACCCATGAAGAACTTCTAAGCAAGAATGGTGTCTACACGGCATTAGTCAGGAGACAACTACAATCAACAAAAACTGAAATCTAGTCTACGACCAGACCAGCTAGCTGATCAATGTGTAATCTTGTCTCGGTTCTTGATATACTCGATTCTCAGTTAAGTGTGCACATGATAACTAAGCTGACCCCTCCATGCTGTCCAACTTTGAGAATGGATAACTAAGCTGCTATAACATGAAGTTGGGGGTGGGGTGGGAAGTGCTTTTTCCCTCCCTTTTGCTGTTAGACAAAAAAGCCTAGATTTTTTTTTTCTTATATAAGCTTGTAGCTCTTATACCTCAACATTTCTATGGAGGTAAATTCAAGTAAGGTTTAATTTAATC 2182 0.4216 MPGFRSERAPLLERKEGGKRDDAPNQPSDLEHGDAVPAANVGFSRVFSLAKPDAGKLIIATLALLVASTSSILIPKFGGKIIDIVSGDIETPEEKARALDAVKNTILSIFLIVVVGSVCTALRAWLFSSASERVVARLRKRLFAHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLGFMFATSWKLTLLALAVVPVISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAIRTVRSFAKEEYEISQYSEKVDETLKLGLKQAKVVGLFFGGLNAASTLSVIVVVIYGANLTITGSMSAGDLTSFILYSLTVGSSVSGLSSLYTVAMKAAGASRRVFQLLDRECSMPKSGNKCPLGDQDGEVELDDVWFSYPSRPDHTILKGIALKLQPGSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLVEISHEHLHSKISIVSQEPILFNCSIEENIAYGIDGKVDAVDVENASKMANAHEFISKFPEKYQTHVGERGVRLSGGQKQRIAIARALLMNPRILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADIVAVVSDGQIVERGTHEELLSKNGVYTALVRRQLQSTKTEI 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00481 628 Pfam ABC transporter 400 550 IPR003439 GO:0005524
Bach5g00481 628 Gene3D ABC transporter type 1, transmembrane domain 108 379 IPR036640 GO:0005524|GO:0016020
Bach5g00481 628 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 31 625 IPR039421 -
Bach5g00481 628 FunFam ABC transporter B family member 25 380 622 - -
Bach5g00481 628 SMART AAA_5 409 602 IPR003593 GO:0016887
Bach5g00481 628 MobiDBLite consensus disorder prediction 8 28 - -
Bach5g00481 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 620 IPR027417 -
Bach5g00481 628 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 58 348 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach5g00481 628 CDD ABC_6TM_AtABCB27_like 60 356 - -
Bach5g00481 628 CDD ABC_MTABC3_MDL1_MDL2 382 620 - -
Bach5g00481 628 ProSitePatterns ABC transporters family signature. 522 536 IPR017871 GO:0005524|GO:0016887
Bach5g00481 628 PIRSF ABC_prm/ATPase_B 7 628 - -
Bach5g00481 628 Pfam ABC transporter transmembrane region 57 332 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bach5g00481 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 619 IPR003439 GO:0005524
Bach5g00481 628 Gene3D - 380 624 IPR027417 -
Bach5g00481 628 MobiDBLite consensus disorder prediction 1 35 - -
Bach5g00481 628 FunFam ABC transporter B family member 25 109 379 - -
Bach5g00481 628 SUPERFAMILY ABC transporter transmembrane region 45 363 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00481 Bach-Chr5 3287861 3292553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00481 110 628 Calmodulin-binding Proteins AT2G36910 39.848 4.65e-106 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00481 - - qsa:O6P43_022927 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00481 5 3287861 3292553 Bach5g00481 5 3287861 3292553 ECH