Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00467 ATGAGGATGGGCCTCCACCAGCGTGTCGGCCCAGAATGGCTGGTTTTAGACGAACTCTGTACCCAAGAGAGCAGACAGCAGGAGGGAGCGAAGGTTACAGCAATGGCTTTCTTTGCAAGAATTGGGAACCTACTAAGGCAAGCAGCAAACAAGCAGATCAGTTCACAATTACGTTCATCACCATCTATTTTTCAGGCTATAAGATGCATGTCATCCATGCCAAGCTCAAAGCTTTTTGTGGGAGGCGTATCGTATTCTACAGATGAGAGTAGTTTGAGGGAAGCTTTTTCAAAATATGGTACAGTTGTTGACGCAAGGGTAATCGTGGATCGTGAAACTGGTAGATCCAGAGGATTTGGCTTTGTAACTTTCACTTCAGTCGAGGAGGCATCAAGTGCCATTCAGGCCTTGGATCAAAAGGACCTTCATGGCCGCATAGTTAGGGTAAACTATGCTAACGAAAGGACTCGTGGCTTTGGTGGTGGTGGTTATGGCAATGCTCCCTATGGTTCTGGCACTGGCTTTGGAGGTGCTTATGGTAATGCTCCCTATGAGGGTTCTGGAAATGGTGGCAGCTATGGTGATAGTGGTGCATATGGTGGCAATGCTGCTGGAGGTTATGGTGGTGGTGGATATGGTGCAGGAAGTTATGGGTCAGGTGGCAATTATGGGAGTGGAGGTTCTGGCAATAACTATGCCGCAGATAGTTTTGGAAGTGGAAGCACTGGTGGCAGTTATGGGAGTTCTGGAAGTGGTGGCAGCTATGGTGATGGTGGTGTATATGGTGGCAATGCTGCTGGAGGTTATGGTGGTGGTGGATATGGTGCAGGAAGTTATGGGTCAGGTGGCAATTATGGGAGTGCAGGTTCTGGCAATAACTATGGTACTGATAGTTTTGGAAGTGGAAGTGCTGGTGGAAGTCCTGGAGGTTATGGTGGTAACACTGGAAACTTCGGTGTTACTGGTGGTGGTGGAGGAAGTGACACCTACGGTAGTGCTCCTGGTTTTGGCGGGGCTGCTGGTGAAGGCAGTATTGCTGGTTTTGGTAAGAGTGATAACTTGGGGAGTGGTGGCGGTGATGGTTATCCTAGTTCTGGTTCTGGTGGTGGTGACAGTGCCATTAGTGGATTTCATGGAAGTAATGAGGGACTCGGATATGGGAGTAGTGGTCAATTGGATAGCAAAGAAAGTGTCAGTCTGGGTGAGGATGTTGGAGATTACGAGGAACCATTGGAAGGAAATCACCGGGATGGTGATGATGCTAGTGATTTTGCTAGAAGAGCTTGA 1287 0.4848 MRMGLHQRVGPEWLVLDELCTQESRQQEGAKVTAMAFFARIGNLLRQAANKQISSQLRSSPSIFQAIRCMSSMPSSKLFVGGVSYSTDESSLREAFSKYGTVVDARVIVDRETGRSRGFGFVTFTSVEEASSAIQALDQKDLHGRIVRVNYANERTRGFGGGGYGNAPYGSGTGFGGAYGNAPYEGSGNGGSYGDSGAYGGNAAGGYGGGGYGAGSYGSGGNYGSGGSGNNYAADSFGSGSTGGSYGSSGSGGSYGDGGVYGGNAAGGYGGGGYGAGSYGSGGNYGSAGSGNNYGTDSFGSGSAGGSPGGYGGNTGNFGVTGGGGGSDTYGSAPGFGGAAGEGSIAGFGKSDNLGSGGGDGYPSSGSGGGDSAISGFHGSNEGLGYGSSGQLDSKESVSLGEDVGDYEEPLEGNHRDGDDASDFARRA 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00467 428 SMART rrm1_1 77 150 IPR000504 GO:0003723
Bach5g00467 428 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 46 179 - -
Bach5g00467 428 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 240 - -
Bach5g00467 428 CDD RRM2_NsCP33_like 77 152 - -
Bach5g00467 428 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 78 146 IPR000504 GO:0003723
Bach5g00467 428 MobiDBLite consensus disorder prediction 382 396 - -
Bach5g00467 428 PRINTS Eggshell protein signature 190 201 - -
Bach5g00467 428 PRINTS Eggshell protein signature 305 323 - -
Bach5g00467 428 PRINTS Eggshell protein signature 250 265 - -
Bach5g00467 428 PRINTS Eggshell protein signature 279 289 - -
Bach5g00467 428 SUPERFAMILY RNA-binding domain, RBD 72 178 IPR035979 GO:0003676
Bach5g00467 428 Gene3D - 22 169 IPR012677 -
Bach5g00467 428 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 76 154 IPR000504 GO:0003723
Bach5g00467 428 MobiDBLite consensus disorder prediction 341 428 - -
Bach5g00467 428 MobiDBLite consensus disorder prediction 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00467 Bach-Chr5 3192387 3195051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00467 75 155 Eukaryotic Initiation Factors Gene Family AT4G34110 35.802 5.08e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00467 K12741 - gmx:100782808 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00467 5 3192387 3195051 Bach5g00467 5 3192387 3195051 ECH