Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00461 ATGGCATCGGCAAAGCGATGCCACTATGAAGTCTTAGGTCTCCAACGCGAATGCACAGCCGACGAGATCCGATCGGCTTACAAGCGGCTTGCCCTTCAACGCCATCCTGATAAGCTCGTCCAGTCCGGCTTGTCTCAAGCTGAAGCTACAGTTCAATTCCAAGAGTTGCACCATGCCTACGAGGTCCTCTCCGACCCAAAGGAGCGAGCTTGGTACGACTCACACCGTTCTCAGATTCTCTTCTCCGGTCCCAACTCGGTCGGAAACCCGGTTCCTACTTCATTCATCCCTAATCTCTTCTCCTTCTTTTCGAATACCGTTTATTCTGGGTACTCAGACTCCGGCAAGGGCTTCTATAAGGTCTATACTGATGTATTTGACAAAATCCATGCCAATGAGATTAATTTCGCTAAGCAATTAGATTTAGGTATTGATGCTGTTCGACAAGCTCCTCTCATGGGCAACTTGGAAAGTCCTTATGCCCAGGCGACAGCATTTTATAATCATTGGTTGTGTTTTTCTACGGTGATGGACTTTTGTTGGGTAGACCAGTACGACGTTATGGCTGGTCCCAACCGAAAGTCGAGGCGAGTGATGGAGGATGAGAACCAGAAGCTTAGGAAGAAGGCAAGGAAAGAATACAATGAAACGGTGCGGGGATTGGCGGAGTTTGTCAAGAAGAGGGATAAAAGGGTGATCGATATGATCATAAAGAAGAATAAGGACATTGAGAAGCGGAAAGATGAGGAGAGGGAGAGGAAGAAGAAGTTAGAGAAGGAGAAAATGGAGAGAGCGATGGCATACGAGGAGCCTGAGTGGACTAAAGTTGAGGAGGATGGAGAAGATGAGGCAAACTGGTTTGAAGAGGTAGAGCAAGAGAAGAAGAAGAAGATGGATGTTCAGAAGTTGTATTGTGTCCTCTGTGGGAAGAAGTTTAAGAGTGAGAAGCAATGGAAGAATCATGAGAAATCAAAGAAGCATAAAGAAAAAGTTGCTGAATTTAGGGACTCTCTTGATGATGATGAGCGAGTTGAAGAGGATGTAGAAGTAGAGTTCGAAGGAGAAGGGAAGGAGGGAGTCGAGGTGAATGATCAATCAGAGGACCTCCACATAGCAGAGGAAGATGATAGAAATAGGGCTGATTTTAATAATGATGAGAGTGGATATTTCGATTCCAAGGATGCAAAGAAGGGGGAAGAGATTGGTAAGGCTGTTGTTGGTTTTGATGATGGTGACATGGATGTTCTTGAAGCAATGATGGCTGGGCGCAAGAGCAGAAAAAATGCTGCTTCAAAGCACGAGCCCAAGGCTTCAGAGACATCAATTAAAATTGATAATGAGAATGATGCGGTTGGCTTTATGGAATATAACAACCGAAAAAGCGCTAGAAAGAACCGTCGAGCTAAGAAAGAGAAGGGGGAGTGTTATTTCCAATCTTTTGTTGAAGAGGAAGGTAATGGTAAAGAGAGCGAGCAGATCGGTAGACATAAGAAGACTTCAAATCAACCTACTGATAAAAAAGGAACTGCAAAGGACATGAAATCCAAAGCAAAAAGTTCGTCCAAAGGAAGAAAAGCTAAGGTGACCTCGAAGAATCTAGGCAATGTTTGTGAGACGTGTGGAGAGGAGTTTGATTCAAGGTAA 1644 0.4459 MASAKRCHYEVLGLQRECTADEIRSAYKRLALQRHPDKLVQSGLSQAEATVQFQELHHAYEVLSDPKERAWYDSHRSQILFSGPNSVGNPVPTSFIPNLFSFFSNTVYSGYSDSGKGFYKVYTDVFDKIHANEINFAKQLDLGIDAVRQAPLMGNLESPYAQATAFYNHWLCFSTVMDFCWVDQYDVMAGPNRKSRRVMEDENQKLRKKARKEYNETVRGLAEFVKKRDKRVIDMIIKKNKDIEKRKDEERERKKKLEKEKMERAMAYEEPEWTKVEEDGEDEANWFEEVEQEKKKKMDVQKLYCVLCGKKFKSEKQWKNHEKSKKHKEKVAEFRDSLDDDERVEEDVEVEFEGEGKEGVEVNDQSEDLHIAEEDDRNRADFNNDESGYFDSKDAKKGEEIGKAVVGFDDGDMDVLEAMMAGRKSRKNAASKHEPKASETSIKIDNENDAVGFMEYNNRKSARKNRRAKKEKGECYFQSFVEEEGNGKESEQIGRHKKTSNQPTDKKGTAKDMKSKAKSSSKGRKAKVTSKNLGNVCETCGEEFDSR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00461 547 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Bach5g00461 547 MobiDBLite consensus disorder prediction 479 532 - -
Bach5g00461 547 Coils Coil 233 260 - -
Bach5g00461 547 MobiDBLite consensus disorder prediction 318 395 - -
Bach5g00461 547 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Bach5g00461 547 MobiDBLite consensus disorder prediction 479 519 - -
Bach5g00461 547 SUPERFAMILY beta-beta-alpha zinc fingers 299 339 IPR036236 -
Bach5g00461 547 ProSiteProfiles Zinc finger C2H2 type domain profile. 303 332 IPR013087 -
Bach5g00461 547 MobiDBLite consensus disorder prediction 355 395 - -
Bach5g00461 547 Gene3D Classic Zinc Finger 289 350 - -
Bach5g00461 547 SMART dnaj_3 6 68 IPR001623 -
Bach5g00461 547 ProSitePatterns Zinc finger C2H2 type domain signature. 305 327 IPR013087 -
Bach5g00461 547 Gene3D DnaJ domain 1 85 IPR036869 -
Bach5g00461 547 Coils Coil 196 216 - -
Bach5g00461 547 PRINTS DnaJ domain signature 27 42 IPR001623 -
Bach5g00461 547 PRINTS DnaJ domain signature 48 68 IPR001623 -
Bach5g00461 547 PRINTS DnaJ domain signature 9 27 IPR001623 -
Bach5g00461 547 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 2 474 IPR044648 -
Bach5g00461 547 MobiDBLite consensus disorder prediction 339 354 - -
Bach5g00461 547 SUPERFAMILY Chaperone J-domain 4 88 IPR036869 -
Bach5g00461 547 CDD DnaJ 7 65 IPR001623 -
Bach5g00461 547 Pfam DnaJ domain 8 73 IPR001623 -
Bach5g00461 547 MobiDBLite consensus disorder prediction 422 448 - -
Bach5g00461 547 SMART ZnF_U1_5 300 334 IPR003604 GO:0003676|GO:0008270
Bach5g00461 547 MobiDBLite consensus disorder prediction 422 443 - -
Bach5g00461 547 Pfam Zinc-finger double-stranded RNA-binding 302 328 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00461 Bach-Chr5 3162442 3164511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00461 445 547 C2H2 Transcription Factor Family AT1G74250 34.234 2.14e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach5g00461 DnaJ 1.5e-20 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00461 K09506 - qsa:O6P43_022906 678.322