Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00435 ATGGCTGGGGAGTCATCTTCGTCTTCGCCTGTCTTGTTCATGGAAGTTCTCGACGATGTTGAGGACTACGTTTGGGCAAATCAAGCAGAAGGTTCATTGCCATGGGACACATTTCATCATGTTTTTGAACTTGTGCAGAATGGAAATGAGGCATTTCGAGAGAACCGTATGGAAGAGGCAATAAACTTTTACTCCAGAGCAAATAACATCAGAACTGGTGATCCTGTTATCCTCAGCAATCGATGTGCAGCTTATCTTAGGATTAGCCAATTCTTGAAGGACAGATCTCCATCAGCTTCAGAATATAAACCTTTGAGTGGGCTTGATCCTACTACACATGCTGAACTTGGTTTGAAGGATGCTGAGAAGCTTGTTGACATCCGAATTAATTCAGTAAAACCGTACCTTTTAAAGGCCAATGCTCTTTTTTTGTTGGAGAAATACGAAAAGGCCCGGGATGTTATTCTTTCAGGCCTTCAAGTTGATCCATATAGTAATTCCCTTCAGGCTTCTCTTAAAAATTTGGAAAGAGCAGTAACTAGTTTGATGGGAACCCGTACACACGGACAACCAGAGCGTACTGATGACTTTGATTGCACTCTTTGCCTGAAGTTATTGTATGAACCTGTTACAACACCTTGTGGACACTCTTTTTGCCGCTCATGTCTATTTCAGTCAATGGATCGTGGTAACAAATGCCCGTTGTGCCGGACGGTTCTTTTTATTAGTCCTAGATCGTGCTCCATCAGTGTGAAATTGAACAACATTATACAAAAGAACTTTCCTGAGGAATATGCTGAAAGGAAGAAAGAGCATGACAGTTTGACCAACTTCGGTGTGGATTTGTTGCCACTTTTTGTCATGGATGTTGTCGTCCCATGTCAAAAATTTCCACTCCATATATTTGAACCTCGGTACAGACTTATGGTCAGAAGAATAATGGAAGGAAATCATCGCATGGGAATGGTGATAATTGATTCTACAACAGGTTTTTTAGCTGAGTTTGCCTGTGAAGTGGAAATCACTGAGTGTGAGCCACTTCCAGATGGACGTTTCTACATAGAGATTGAAAGTCGCCGGAGGTTTCGCATAATCAGATCTTGGGATCAGGATGGATATCGTGTTGCGGAGGTTGAATGGATACAGGACATTATGCCACCAGATGGGACAAGAGAGAGGGAGGATTTGCAGGAATTGACGGGTAATGCAGCAGAGTATGCTCGATCATGGATAAGAAGGGCAAGAGAAGCTGCAAGACAAGATCATAGAAGACTCGAGAAACTCCTGAACGTTGAAGCAACGATGCCCCCCACACGAGACCCTGAGTGCTTCAGTTTTTGGCTCACCACCTTATCAAACCGGAGGCCTTCTGAAAGATTGGATCTTTTACGCATAAGAGATACCAAAGAGAGGATTAGACGTGGCTTGATATATCTCCGAGCAGACGAACAAGGCTGCCGGATTCAATAA 1470 0.4327 MAGESSSSSPVLFMEVLDDVEDYVWANQAEGSLPWDTFHHVFELVQNGNEAFRENRMEEAINFYSRANNIRTGDPVILSNRCAAYLRISQFLKDRSPSASEYKPLSGLDPTTHAELGLKDAEKLVDIRINSVKPYLLKANALFLLEKYEKARDVILSGLQVDPYSNSLQASLKNLERAVTSLMGTRTHGQPERTDDFDCTLCLKLLYEPVTTPCGHSFCRSCLFQSMDRGNKCPLCRTVLFISPRSCSISVKLNNIIQKNFPEEYAERKKEHDSLTNFGVDLLPLFVMDVVVPCQKFPLHIFEPRYRLMVRRIMEGNHRMGMVIIDSTTGFLAEFACEVEITECEPLPDGRFYIEIESRRRFRIIRSWDQDGYRVAEVEWIQDIMPPDGTREREDLQELTGNAAEYARSWIRRAREAARQDHRRLEKLLNVEATMPPTRDPECFSFWLTTLSNRRPSERLDLLRIRDTKERIRRGLIYLRADEQGCRIQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00435 489 SUPERFAMILY TPR-like 43 175 IPR011990 GO:0005515
Bach5g00435 489 Pfam Zinc finger, C3HC4 type (RING finger) 199 236 - -
Bach5g00435 489 Pfam ATP-dependent protease La (LON) substrate-binding domain 283 479 IPR003111 -
Bach5g00435 489 Gene3D - 281 383 IPR046336 -
Bach5g00435 489 SUPERFAMILY PUA domain-like 283 479 IPR015947 -
Bach5g00435 489 Gene3D Tetratricopeptide repeat domain 39 178 IPR011990 GO:0005515
Bach5g00435 489 ProSitePatterns Zinc finger RING-type signature. 214 223 IPR017907 -
Bach5g00435 489 SMART lon_5 282 481 IPR003111 -
Bach5g00435 489 SUPERFAMILY RING/U-box 193 261 - -
Bach5g00435 489 SMART ring_2 199 236 IPR001841 -
Bach5g00435 489 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 185 278 IPR013083 -
Bach5g00435 489 CDD RING-HC_LONFs_rpt2 196 240 - -
Bach5g00435 489 ProSiteProfiles Zinc finger RING-type profile. 199 237 IPR001841 -
Bach5g00435 489 ProSiteProfiles Lon N-terminal domain profile. 280 481 IPR003111 -
Bach5g00435 489 PANTHER RING FINGER PROTEIN 127 32 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00435 Bach-Chr5 2935722 2942393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00435 183 240 C3H Transcription Factor Family AT1G74990 34.426 9.33e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00435 - - qsa:O6P43_001984 813.913