Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00417 ATGCAGGAAAGTAAAGATCCTGCAATCAAGCTTTTCGGCCAAAAGATTCCCTTGCCGGGTGACGACCCGTCCGCGCCGTGGCTGATTTATGTGGAGAAGGAAGAGGAGAGAGAACAAACAGAAGACGGTGATGACGAGGCACAAGAGCAAAACGAAGAAGCAGACAAGGATTCTGGAGGTGGAAACGTCACTGAGAGGGCTCAAGAGAAAGAGAAAGACAGTGATCTGTCTCCAAATTCCAATTCAGAGGGATTGGCTGAGGGTACTGTAAACCCAAAAACACCTTCAAAAGACGAGGAAACTGCAAAATCAAGAAGTGACAAGTCAGAGAAGGAGGATAGTGATGGAAACAACTGGCAAGAGAAAAGCCTGAAGAAGCCAGATAAACTACTTGCGTGTCCACGTTGCAATAGCATGGACACTAAATTCTGTTACTATAACAACTACAACGTCAACCAGCCACGTTATTTCTGCAAAGCTTGTCAAAGGTACTGGACTGCAGGTGGTACCATGAGGAATGTACCAGTCGGGGCAGGACGAAGAAAGAACAAGAACTCTTCCTCTCATTATCGCCATATTTCCATTTCTGAGGCTCTTCAAGCTGCGAGAATTGATGCACACGCACTCAATGGAACCCATCTTCCGGCATTGAAAACAAATGGTAAAGTCCTCAGCTTTGGATTAGATGCACCTATTTTCGATTCCATGGCGTCTATCCTCAATCTTGCAGATGAAAATGTTGTTAGAGGTACGCGTACCCGAAATGGGTTTCATGGATTTGAGGAACAAAGAATTCCAGTTGCTTGCAAAGGTGGGGAAAATGGTGATGACTGCTCTAGTGCATCTTCCATCACAGTTTCAAATTCCATGGAAGAAAGTGGGAAAAGTACATCTCATGAATCACTACTCCGAAACAATGGCGTCTCTCCTCAATTCCCATGTTTGGCTGGTGTTCCTTGGCCTTATCCCTGGAATTCTCCACTTCCCTCACCTCCTGCTTTATGTCCTCCAGGGTTTTCCCCCCTCTCATTCTATCCTGCAGCTTTTTGGAACTGTAATGTGCCAGTGCCAGGGAATTGGAACATGAATATGAACATGCACTGGTTTTCCCCACATTCCCCTGTCCCTAATCCAAACTCTGGTTCAAATTCTCCAACACTGGGGAAGCACTCAAGGGATGGACAGCTGCTTAAACCAGAGTATTTGCATCACAAAGAAGAACCACCAAAACAGAAAAATGGGTGTGTTTTGGTTCCCAAAACGTTAAGAATTGATGACCCAAATGAAGCTGCTAAGAGTTCTATATGGGCAACTCTTGGGATCAAGAATGAATCAGCGAGTGGGGGAGGCATGTTTAAGGCATTCCAAGCAAAGAAAGACAAAAAGAATCATGATGTTGAAACCTCTCCAGTCTTGTGGGCTAATCCTGCAGCCTTATCTAGATCCCTTAATTTTCACGAGATCTCCTGA 1470 0.451 MQESKDPAIKLFGQKIPLPGDDPSAPWLIYVEKEEEREQTEDGDDEAQEQNEEADKDSGGGNVTERAQEKEKDSDLSPNSNSEGLAEGTVNPKTPSKDEETAKSRSDKSEKEDSDGNNWQEKSLKKPDKLLACPRCNSMDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISISEALQAARIDAHALNGTHLPALKTNGKVLSFGLDAPIFDSMASILNLADENVVRGTRTRNGFHGFEEQRIPVACKGGENGDDCSSASSITVSNSMEESGKSTSHESLLRNNGVSPQFPCLAGVPWPYPWNSPLPSPPALCPPGFSPLSFYPAAFWNCNVPVPGNWNMNMNMHWFSPHSPVPNPNSGSNSPTLGKHSRDGQLLKPEYLHHKEEPPKQKNGCVLVPKTLRIDDPNEAAKSSIWATLGIKNESASGGGMFKAFQAKKDKKNHDVETSPVLWANPAALSRSLNFHEIS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00417 489 MobiDBLite consensus disorder prediction 37 52 - -
Bach5g00417 489 Coils Coil 30 57 - -
Bach5g00417 489 ProSiteProfiles Zinc finger Dof-type profile. 131 185 IPR003851 GO:0003677|GO:0006355
Bach5g00417 489 MobiDBLite consensus disorder prediction 276 301 - -
Bach5g00417 489 Pfam Dof domain, zinc finger 129 185 IPR003851 GO:0003677|GO:0006355
Bach5g00417 489 MobiDBLite consensus disorder prediction 93 123 - -
Bach5g00417 489 MobiDBLite consensus disorder prediction 1 123 - -
Bach5g00417 489 PANTHER CYCLIC DOF FACTOR 2 1 488 IPR045174 GO:0003700|GO:0006355
Bach5g00417 489 MobiDBLite consensus disorder prediction 53 77 - -
Bach5g00417 489 ProSitePatterns Zinc finger Dof-type signature. 133 169 IPR003851 GO:0003677|GO:0006355
Bach5g00417 489 MobiDBLite consensus disorder prediction 271 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00417 Bach-Chr5 2850297 2852705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00417 1 487 C2C2-Dof Transcription Factor Family AT3G47500 48.819 1.48e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach5g00417 zf-Dof 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00417 - - qsa:O6P43_001965 601.282