Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00409 ATGAAGAAGAGACAGATAGTGGTGAAAAGAGATGTTTCCAACACTTCATCCTCAGTGATGAGAAATATTCGATACGGCGAGTGTCAAAAGAATCATGCAGCTAATATTGGAGGGTATGCTGTGGACGGATGCAGAGAGTTTATGGCCAGTGGTGGGGAGGGGACAAGTGGGGCGCTTACATGTGCGGCTTGTGGCTGCCACAGGAATTTTCACCGAAGGGAAGTGCAAACTGAAGTTGTCTGTGAGTACTCTCCTCCTAATTCTTCTCGTTGA 273 0.4725 MKKRQIVVKRDVSNTSSSVMRNIRYGECQKNHAANIGGYAVDGCREFMASGGEGTSGALTCAACGCHRNFHRREVQTEVVCEYSPPNSSR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00409 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Bach5g00409 90 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
Bach5g00409 90 Pfam ZF-HD protein dimerisation region 23 75 IPR006456 -
Bach5g00409 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 13 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00409 Bach-Chr5 2814388 2814660 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00409 1 89 Zinc finger-homeobox gene family AT1G18835 76.667 2.50e-43 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach5g00409 ZF-HD_dimer 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00409 - - gmx:100785967 170.629