Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00408 ATGATGGGAAGACCACCCTGCTGTGACAAAGTTGGGGTCAAGAAAGGACCTTGGACTCCAGAGGAGGACATCATCTTGGTCTCTTACATTCAAGAACACGGACCTGGCAATTGGAGATCAGTTCCCACCAATACAGGTTTGCTCCGATGCAGTAAAAGCTGCAGACTAAGATGGACAAACTACCTTAGGCCTGGTATCAAACGAGGCAACTTCAATCAACATGAAGAGAAGATGATAATCCACCTCCAAGCTCTTTTGGGCAACAGATGGGCTGCCATAGCTTCCTATCTTCCACAGAGGACAGACAATGACATAAAGAATTACTGGAATACCCATTTGACGAAAAAGCTGAAAAAACTTCAACCAGCTGGGAGCTGCGAGGGTCATGAACAGGATGGATACTCATGTTCTCAGCCAAAGGGTCAGTGGGAGAGAAGGCTTCAAACAGATATCCATATGGCCAAACAAGCCTTGTGGGAGGCTCTCTCCCTTGACAAGCCTTCAACCCATTTCCCGATTGATAAAAATAATTTATCTCTTGAGACCAATAATAATAAGCCAAACCAGCAAGGAATATCCTCTAATTATGCATCAAGCGCAGATAACATAGCCCGTTTGCTCCAGAACTGGATGAAGCAAACCCCAGAGTATGATCGAACAACAAATTCAGGGACGTTTTCTTTGTTCAGCGATGCCAACGACCTCAACATGGTGACTACTACGACCACCACCACTACCACTACTAGAGGAGCTGGTTCAAGTTGCAGTGATGGTGCACAGAGTGGCAGTGCCACCACCCCCGGTGCCCTTGATTCCCTATTGAGCTTCAACTCTTCAAAGTCTGATGCTTCTCAGTCTGCTGCGTCTACGGATGATAACACCAATTTGACAACAGAGATTGGGCTTCTCCAAGATGAAAGCAGGCCAAATTTGGAAGAAGCTGGACAAGTCCCTCTCACATTGCTGGAGAAGTGGCTTTTCGATGATGCCGCAGCTCAAGGCCATGAAGATCTAATCAACATGTCAGTCGATGAAACTACATCAAGCTTGTTTTAG 1056 0.4621 MMGRPPCCDKVGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFNQHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLTKKLKKLQPAGSCEGHEQDGYSCSQPKGQWERRLQTDIHMAKQALWEALSLDKPSTHFPIDKNNLSLETNNNKPNQQGISSNYASSADNIARLLQNWMKQTPEYDRTTNSGTFSLFSDANDLNMVTTTTTTTTTTRGAGSSCSDGAQSGSATTPGALDSLLSFNSSKSDASQSAASTDDNTNLTTEIGLLQDESRPNLEEAGQVPLTLLEKWLFDDAAAQGHEDLINMSVDETTSSLF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00408 351 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bach5g00408 351 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Bach5g00408 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 257 - -
Bach5g00408 351 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach5g00408 351 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bach5g00408 351 SMART sant 14 64 IPR001005 -
Bach5g00408 351 SMART sant 67 115 IPR001005 -
Bach5g00408 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Bach5g00408 351 MobiDBLite consensus disorder prediction 243 295 - -
Bach5g00408 351 FunFam MYB-related transcription factor 14 67 - -
Bach5g00408 351 Gene3D - 70 135 - -
Bach5g00408 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Bach5g00408 351 CDD SANT 70 113 IPR001005 -
Bach5g00408 351 Gene3D - 14 67 - -
Bach5g00408 351 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bach5g00408 351 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00408 Bach-Chr5 2803643 2805215 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00408 2 343 MYB Transcription Factor Family AT5G62470 49.361 2.42e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g00408 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00408 K09422 - zju:107407717 444.891