Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00397 ATGGCGAGAGATCGGGACGAGCATGGAGCTGCTTTCCTGAAACATGGTGAAACCTCACAATCATTGTCTCTTTCAGATATCTTTACACTGAAGGATCGATCTGTAACTCCTATACTGAAGGTAATGTATGATAGTTTAAGCTGTAATCCATTGGATTCTTTAGTGCAGTGGTTGATGGCTATTTCCTCTGTGCAGCCAGCGAATCCTCCTGTACGGGCTAATGTGCTGTATTTGAGCACTGAATTCTCGTTGCCCATTGCGGAGAAAGTAAAAAATATTTTTAATCCGTACTTTGATAAAGCTCAGAACACTAGTGTGTACCATTTTAGCATGTTCCATGCCTCTCATCACATTTCACCTATAGAAGCAGAAGCAGCTGCTGTTCAAGCTGTTTCAAGAACACTCTGCCCTTTGAAGATTGTTTTGGATAGGATGATTCTGACTTCAACAGGCGTACTTCTGGGTTGCTATATCACTTATCCCATAAGAATTCGTGCTAAGTTGAGGAATGCGCTTCCACGCGCTCCAGAGGAGCAACTATATGATGCTGCAATTCTTCACACTTCATTTGCAAGGCTTTTGGGTCCACCTAAAGCATCGCCTACGGCAGTAGTGTCACAACTCTGGTATGTTGAGGAACATGATGTGCTTGCTCTTGCACTGAACGGAAGAATGAATATTCACAAGTCGGCTGCTCAAGGACATGAAGTAAAGAAGGATGCACAAGGATCAGGGAAAGTAATGATTACTCGCGTGAATGTACAAGGAGCAGAACAATCGGATTATTTGCTTTGTATCAGCATGGGATCAGAGGCTCCAGCTCTATTGGTTGAAAAGGTCAATATGTTAGAAGAGACATCAGAAAACAGATCTAGTCCTGGCGAAAAGAACCAAGCAAAAGTTCCTAAAAGGATTCATAAGGCTGTAAAGGAGAAAATGAAGCGTGAGCATTTGAACGAACTCTTTGTTGATCTTGCCAATGCTCTTGAACTGAGTCAGCAGAACAGTGGAAAGGCATCTATACTGTGTGAAGCCATTAGGCTGCTAAAGGACTTGCTTGGTCAGATTGAATTCCTCAAGAAGGAGAATGCATCTCTGTTATCCGAATCTCATTATGTGACCACGGAGAAAAATGAGCTGGAGGAGGAAAATTCTACCCTTGAAACTGAAATTGAGAAGCTTCAAGGTGAGATACAAGCAAGAGAGGCTCAATCTAAACCTGACCTGAATGTACTTCCTACTTTGGAATTTCAGCCACCAGAGCAGACAACAAATTTTGTAGGAGAAAGCCTCCAATTACCTACCTTAGAACCGACAATGCAGCAAGGGTCTGCCGTCTTGATTGTCCCCTTTCGCCCTCATCTTCAATCTGCATCTTTAGCTCCCAATGCTGCTGACCTCTCGTTGAAGTCTTCCTCTAATATCAGTAAACCACATCCAAGGTATCCCACACCAGCAGATTCGTGGCCTTCACAGCTGCTTGGGGAACAACCAACTTCGAGTTAA 1506 0.4343 MARDRDEHGAAFLKHGETSQSLSLSDIFTLKDRSVTPILKVMYDSLSCNPLDSLVQWLMAISSVQPANPPVRANVLYLSTEFSLPIAEKVKNIFNPYFDKAQNTSVYHFSMFHASHHISPIEAEAAAVQAVSRTLCPLKIVLDRMILTSTGVLLGCYITYPIRIRAKLRNALPRAPEEQLYDAAILHTSFARLLGPPKASPTAVVSQLWYVEEHDVLALALNGRMNIHKSAAQGHEVKKDAQGSGKVMITRVNVQGAEQSDYLLCISMGSEAPALLVEKVNMLEETSENRSSPGEKNQAKVPKRIHKAVKEKMKREHLNELFVDLANALELSQQNSGKASILCEAIRLLKDLLGQIEFLKKENASLLSESHYVTTEKNELEEENSTLETEIEKLQGEIQAREAQSKPDLNVLPTLEFQPPEQTTNFVGESLQLPTLEPTMQQGSAVLIVPFRPHLQSASLAPNAADLSLKSSSNISKPHPRYPTPADSWPSQLLGEQPTSS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00397 501 Coils Coil 349 369 - -
Bach5g00397 501 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 302 367 IPR036638 GO:0046983
Bach5g00397 501 Gene3D - 299 377 IPR036638 GO:0046983
Bach5g00397 501 Coils Coil 377 404 - -
Bach5g00397 501 PANTHER TRANSCRIPTION FACTOR BHLH47 268 500 - -
Bach5g00397 501 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 352 IPR011598 GO:0046983
Bach5g00397 501 MobiDBLite consensus disorder prediction 470 501 - -
Bach5g00397 501 CDD bHLH_AtILR3_like 307 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00397 Bach-Chr5 2742786 2749595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00397 268 497 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 52.227 2.48e-67 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00397 - - gmx:100791859 303.908