Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00391 ATGTCTAGCAGAAGGTCGTCACGATCAAGACAATCGGGTGGTTCGAGGAATATCACCGATGATCAGATCAATGACCTTGTCTCTAAGTTGCAACAGCTTCTTCCTGAGCTTCGCAATACCCGCTCGGACAAGGGTTCAGCTGCGAAGGTATTACAAGAGACATGCAATTATATTAGAAACTTGCACAGGGAAGTTGACGATCTAAGCGAACGCTTATCGGAGCTGTTGGCCACAAGTGACACTGCCCAAGCTGCAATTATTAGAAGTTTACTCATGCAATAG 282 0.4574 MSSRRSSRSRQSGGSRNITDDQINDLVSKLQQLLPELRNTRSDKGSAAKVLQETCNYIRNLHREVDDLSERLSELLATSDTAQAAIIRSLLMQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00391 93 MobiDBLite consensus disorder prediction 1 21 - -
Bach5g00391 93 Coils Coil 58 85 - -
Bach5g00391 93 Pfam Helix-loop-helix DNA-binding domain 21 61 IPR011598 GO:0046983
Bach5g00391 93 Gene3D - 20 89 IPR036638 GO:0046983
Bach5g00391 93 FunFam Transcription factor ILI6 8 88 - -
Bach5g00391 93 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 21 79 IPR036638 GO:0046983
Bach5g00391 93 CDD bHLH_AtPRE_like 18 78 - -
Bach5g00391 93 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 61 IPR011598 GO:0046983
Bach5g00391 93 PANTHER TRANSCRIPTION FACTOR PRE 1 92 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00391 Bach-Chr5 2708860 2709661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00391 18 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 83.117 1.46e-39 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00391 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00391 - - csv:101219790 150.599