Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00380 GTTCACCTTCTCCTCTGGTCTTAATCTCCCTGCCATACCGGGCTGCGAAATCACCGCCTGTCTTATTCTGAGTGATGGGTATGAGCTGCCGTTGTTCTCATACCTCGCACATCACCGAAGTCATCATCACCAGCTTCTTCCGCCACAAGCCTTAGAATTCAACGTCGCTGAATTATCTTCACCAGCTCTGATGGCTGCTTAAGATTCTGATTTGGAGGCCTCTTCAAATGGCGGGTGGGAGGGTCTATAGCGACGCTCGTAGTAACACTTCCAATTTGAGTATTTTGCTTCAGAATCAAACCCCTCCTTGTACTTCGGAGCCACGTGATACCCTTTTCCTTTCTGGGTCTTCTTCTCCTTTCCTCGGTTCAAGATCTATGATGAGCTTTGAAGGTATTCAACCAGGAAAAGGTTGTAATAGGTCGCTTTTCCGGCCTTTTGATCATGATGAAAACAGAGACGATGACATGGACGAGTACTTTCATCAACCTGAAAAGAAGAGGCGGCTCACCGCTGACCAAGTGCACTTTCTTGAGAAAAGCTTCGAGGTGGACAACAAGCTCGAACCGGAAAAGAAAATTCAGCTAGCTAAAGACCTTTGTTTGCAGCCTCGACAAGTTGCAATCTGGTTTCAGAATCGCAGGGCACGCTGGAAGACCAAACAGCTAGAGAAAGATTACGATTCTCTCCAAGCTAGCTATAATAGCCTTAAGGCAGACTATGAGAACCTCCTGAAGGAGAAAGAGAAACTAAAATGCGAGGTTGCAAACCTCACAGAAAAGGTGCCTGTCAGAGAGAAACAAGGGGGGAACTTTGAACAAGCTGAAACAAACAGATTGCAGGAACCACAGCAAAAGCCTTTATCTGATTCAGCTGCTTCTGAGGGTGAAGGTTCGAAAACAGCAATTGGGGCGTGTAAACAGGAAGAGATTAGTTCAGCCAAGAGTGACATATTTGATTCAGATAGCCCACATTATACAGATGGAATTCACTCTGCTCTGCTGGAGACGGGTGATTCTTCATATGTTTTTGAACCTGATCAATCAGATCTATCTCAAGATGAAGAAGATAACTTGAGCAAGACCCTACTGCCTCCATACATCTTTCCCAAACTTGAAGATGTTGATTACTCCGACCCGCCTGAAAGTTCATGCAGTTTTGGATTTCCAGTAGAAGATCATGCCTTTTGGTCATGGTCTTACTAA 1205 0.4523 MAGGRVYSDARSNTSNLSILLQNQTPPCTSEPRDTLFLSGSSSPFLGSRSMMSFEGIQPGKGCNRSLFRPFDHDENRDDDMDEYFHQPEKKRRLTADQVHFLEKSFEVDNKLEPEKKIQLAKDLCLQPRQVAIWFQNRRARWKTKQLEKDYDSLQASYNSLKADYENLLKEKEKLKCEVANLTEKVPVREKQGGNFEQAETNRLQEPQQKPLSDSAASEGEGSKTAIGACKQEEISSAKSDIFDSDSPHYTDGIHSALLETGDSSYVFEPDQSDLSQDEEDNLSKTLLPPYIFPKLEDVDYSDPPESSCSFGFPVEDHAFWSWSY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00380 325 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 66 230 IPR045224 GO:0003700
Bach5g00380 325 Gene3D - 93 139 - -
Bach5g00380 325 MobiDBLite consensus disorder prediction 262 281 - -
Bach5g00380 325 Pfam Homeobox associated leucine zipper 145 186 IPR003106 GO:0006355|GO:0043565
Bach5g00380 325 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Bach5g00380 325 MobiDBLite consensus disorder prediction 195 220 - -
Bach5g00380 325 MobiDBLite consensus disorder prediction 188 226 - -
Bach5g00380 325 FunFam homeobox-leucine zipper protein ATHB-6-like 93 139 - -
Bach5g00380 325 CDD homeodomain 90 146 IPR001356 GO:0003677
Bach5g00380 325 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Bach5g00380 325 SUPERFAMILY Homeodomain-like 77 147 IPR009057 -
Bach5g00380 325 Gene3D - 140 191 - -
Bach5g00380 325 Pfam Homeodomain 90 143 IPR001356 GO:0003677
Bach5g00380 325 Coils Coil 144 185 - -
Bach5g00380 325 SMART HOX_1 88 149 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00380 Bach-Chr5 2635041 2636785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00380 34 323 Homeobox Transcription Factor Family AT3G01470 37.500 2.29e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach5g00380 Homeodomain 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00380 - - cave:132174717 480.33