Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00372 TTTTGCTGTTGTGAACAAAAAAATAGGGGCTGTTGTTCTGTTCCGTGTTGTGAACCTTCAAGAACAGCATGGGAAACTGTAACGTTTGTCTGAAAGCAGAGGTCGTAGAAGACAACACCAACCGTTCTACGCAAGGAAAGAAGAGCAAGGATAGAAGACCAAACCCATTTGCAGAGGAAGCTTTTCGTTCACCGGCTCCGATCCGGGTACTGAAGGATGTGATTCCGCTGAGTCACCGAACCCGAATCAGCGACAAGTATATACTGGGTCGCGAGCTGGGTCGTGGAGAATTTGGAATCACCTACCTTTGTACGGACAGAGAGACAAAAGAAGCGCTTGCTTGTAAGTCGATTTCGAAAAGGAAGCTAAGAACAGCGGTGGATATAGAAGATGTAAGGCGCGAGGTTGCAATAATGTCTTCTCTACCTGAGCACCCGAACATCGTGAAGCTCAAGGCAACCTACGAGGACAACGAAAATGTGCATCTTGTGATGGAGCTCTGCGAGGGTGGTGAACTTTTTGACCGAATCGTGGCTAGAGGACATTACAGTGAGCGAGCTGCGGCAAACGTTGCCAGAACAATAGCAGAGGTTGTCAGGATGTGCCATGCTAACGGGGTCATGCATAGGGATCTAAAGCCTGAAAATTTTCTCTTTGCTAACAAAAAAGAGAATTCGCTCCTTAAGGCCATTGATTTTGGGCTCTCTGTGTTTTTCAAGCCTGGAGAGAAATTTTCAGAGATTGTTGGGAGTCCTTACTATATGGCGCCTGAGGTTTTGAAAAGGAAATATGGGCCGGAGGTTGACATATGGAGCGCGGGCGTGATTCTTTATATCTTGTTATGTGGGGTTCCTCCATTTTGGGCTGAGACCGAGCAGGGTGTTGCTTTGGCGATTTTGAGGGGCGTTATTGATTTTAAGAGGGAACCTTGGCCTCAGATATCGGATAATGCAAAAAGCCTCGTGCGCCAGATGTTGGAACCGGATCCTAGTAAGCGCTTGACAGCTCAACAGGTGCTTGAACATTCGTGGCTACAAAATGCGAAGAAAGCTCCAAATGTTCCATTAGGAGATATTGTGAGGTCAAGGCTTAAGCAGTTCTCTGTGATGAATAGATTCAAAAAGAAAGCCCTTCGGGTAATTGCGGAACATTTATCTGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACATTGATGGATACTGACAGGGATGGCAAAGTAACATATGAGGAACTAAAGGCTGGATTAAGAAAGGTTGGTTCACAATTGGCTGAGCCAGAGATAAAAATGCTGATGGAAGTGGCTGACGTTGATGGGAATGGAGTGCTTGACTATGGAGAGTTTGTAGCCGTGACAATTCACTTGCAAAGGATGGAGAATGATGAGCATTTCCACAAAGCATTCAAGTTTTTTGACAAAGATGGGAGCGGGTACATTGAGTTAGGTGAGCTACGAGAAGCATTAGCAGATGAGTCAGGTGAAGCTGAAGCTGAAGCTGATGTAGTAAATGACATCATGCGTGAGGTTGACACTGACAAGGATGGGCGCATAAGTTATGATGAGTTTGTGGCCATGATGAAAACTGGAACTGACTGGAGAAAAGCATCTAGGCAGTATTCAAGGGAGAGATTCAAGAGTCTGAGCCTAAACTTGATGAAGGACGGTTCACTTCAGCTTCAAGATGGGATTAGTGGTCAAACTGTCATGGTTTGACTAGAAAGTTAGTATTTCTT 1735 0.4501 MGNCNVCLKAEVVEDNTNRSTQGKKSKDRRPNPFAEEAFRSPAPIRVLKDVIPLSHRTRISDKYILGRELGRGEFGITYLCTDRETKEALACKSISKRKLRTAVDIEDVRREVAIMSSLPEHPNIVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYSERAAANVARTIAEVVRMCHANGVMHRDLKPENFLFANKKENSLLKAIDFGLSVFFKPGEKFSEIVGSPYYMAPEVLKRKYGPEVDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDNAKSLVRQMLEPDPSKRLTAQQVLEHSWLQNAKKAPNVPLGDIVRSRLKQFSVMNRFKKKALRVIAEHLSVEEVEIIKDMFTLMDTDRDGKVTYEELKAGLRKVGSQLAEPEIKMLMEVADVDGNGVLDYGEFVAVTIHLQRMENDEHFHKAFKFFDKDGSGYIELGELREALADESGEAEAEADVVNDIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMKDGSLQLQDGISGQTVMV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00372 548 MobiDBLite consensus disorder prediction 17 36 - -
Bach5g00372 548 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00372 548 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Bach5g00372 548 ProSiteProfiles EF-hand calcium-binding domain profile. 475 510 IPR002048 GO:0005509
Bach5g00372 548 FunFam Calcium-dependent protein kinase 7 331 508 - -
Bach5g00372 548 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Bach5g00372 548 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Bach5g00372 548 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Bach5g00372 548 Gene3D Phosphorylase Kinase; domain 1 65 149 - -
Bach5g00372 548 MobiDBLite consensus disorder prediction 18 35 - -
Bach5g00372 548 CDD STKc_CAMK 63 321 - -
Bach5g00372 548 SMART efh_1 441 469 IPR002048 GO:0005509
Bach5g00372 548 SMART efh_1 405 433 IPR002048 GO:0005509
Bach5g00372 548 SMART efh_1 369 397 IPR002048 GO:0005509
Bach5g00372 548 SMART efh_1 479 507 IPR002048 GO:0005509
Bach5g00372 548 FunFam Calcium-dependent protein kinase 1 66 149 - -
Bach5g00372 548 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00372 548 Pfam EF-hand domain pair 440 505 IPR002048 GO:0005509
Bach5g00372 548 Pfam EF-hand domain pair 370 429 IPR002048 GO:0005509
Bach5g00372 548 SUPERFAMILY Protein kinase-like (PK-like) 48 346 IPR011009 -
Bach5g00372 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Bach5g00372 548 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Bach5g00372 548 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Bach5g00372 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 57 500 - -
Bach5g00372 548 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Bach5g00372 548 Pfam Protein kinase domain 66 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00372 548 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Bach5g00372 548 Gene3D Transferase(Phosphotransferase) domain 1 150 330 - -
Bach5g00372 548 FunFam calcium-dependent protein kinase 13 150 330 - -
Bach5g00372 548 Gene3D - 331 508 - -
Bach5g00372 548 SUPERFAMILY EF-hand 350 531 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00372 Bach-Chr5 2576883 2580701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00372 1 548 EF-hand Containing Proteins AT1G18890 82.664 0.0 932
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bach5g00372 Pkinase 5.5e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00372 K13412 - gmx:100809838 966.837