Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00358 CAGACTTCGCTCGCTCGCCCTCCCCTCACTGTGACTCTCTCTCCCTGTCATCGTCATCCATTAACAGTCTCTATCTTTGAATTGCCATTCTCTCCCTCCTAATTACAAGTTAAATAACCCACATCACTTCACTAAACTCTCTTCTACCACACTCCCCTGCAAGTTCATACCCCCCCCCCCCCCAAACACACTGCTTACTATTCATACCATTCAAATCTCAATTCAAGACCTTCTCGTTTGAATGAATTTGTGATCTTCAAATGGATCCTCCACTCATCAATGAGTCTACATTCTCTCCCGCTAACCCATCTGCTTACAGCTTGGCTGAGATTTGGCCTTTCAGTGGGGAACCGGGTAGCGGAGGATTGGGCCTCCGAATGGGTAATTTGAGTCAGAACTTGGGTGAATTTGCTGAGACTTCGATGCATCGAGATGGGTCGGCGGAGGAATCCACAGTTACGGAGCAGAGTGGCGGTGGAGGTGCTAGTGCCAGTGGAAATCGAAGGAAGAGGAAGGATGCCAATTCGGAGGGCGAGTCATCAAAGATGGTTTCGACTAGTAGCGCCAATGAATTGAATGATTCTGGCAACAAACGGATAAAATTAGGAGGATCAGGGGACGAGAATAGTGGAGTGAAAGCTGAAGCAGAAGCAGGTTCAGCAGGTGGTAATAAGTCAGCTGAACAAGGTACTAAACCTTCTGAGGCACCTAAGCAAGATTATATACATGTCAGAGCAAGAAGGGGCCAAGCTACCGATAGCCACAGTCTTGCAGAGAGAGCAAGGAGAGAAAAAATCAGTGAGCGAATGAAAATTCTGCAAGATTTGGTCCCAGGATGTAACAAGGTAATTGGTAAAGCACTTGTCCTGGATGAGATAATAAATTACATCCAGTCTCTCCAGCATCAGGTTGAGTTCCTCTCAATGAAGCTTGAAGCCGTTAATTCTAGATTGAACATGAACCCTACCATTGAAGGGTTTCCTTCAAAAGATCTTGGTACCCAGCCATTTGATGTTGCTGGAATGATATTTGGATCACAAGCAGCCAGAGGATTTGTTGCTGGATCACAACCTGGATGGCTGCACATGCAAATAGGTGGTGGTTTCGAGAGAGCAACATAATTCAAGGAGCCTCAATTGTAGTGACAGATCCAGCAGTGGGATTGGTTACCCACTATGCTCTATTAACGACCAAGGCAATTGGTGATTGTATTCAGTCAATTTGGCCATTGTTGTATTATGATATCATTTGTAGGAACTGCATCTCATCTCCATGTGCACCATCTGACGGGGCATGTTGTGCTTTATTGTAGTAGCAATGAGAAACAATCCTAGTGTGATTTTCGTTTTTAAACTCCGCAGTTGA 1365 0.4535 MDPPLINESTFSPANPSAYSLAEIWPFSGEPGSGGLGLRMGNLSQNLGEFAETSMHRDGSAEESTVTEQSGGGGASASGNRRKRKDANSEGESSKMVSTSSANELNDSGNKRIKLGGSGDENSGVKAEAEAGSAGGNKSAEQGTKPSEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVNSRLNMNPTIEGFPSKDLGTQPFDVAGMIFGSQAARGFVAGSQPGWLHMQIGGGFERAT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00358 286 Gene3D - 160 237 IPR036638 GO:0046983
Bach5g00358 286 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 213 IPR011598 GO:0046983
Bach5g00358 286 FunFam Basic helix-loop-helix transcription factor 160 232 - -
Bach5g00358 286 SMART finulus 169 219 IPR011598 GO:0046983
Bach5g00358 286 Pfam Helix-loop-helix DNA-binding domain 167 214 IPR011598 GO:0046983
Bach5g00358 286 Coils Coil 210 230 - -
Bach5g00358 286 MobiDBLite consensus disorder prediction 47 152 - -
Bach5g00358 286 CDD bHLH_AtBPE_like 153 236 - -
Bach5g00358 286 MobiDBLite consensus disorder prediction 92 108 - -
Bach5g00358 286 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 63 254 IPR024097 GO:0006355
Bach5g00358 286 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 233 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00358 Bach-Chr5 2492757 2495810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00358 1 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 58.020 2.34e-93 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00358 HLH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00358 - - zju:107418528 433.721