Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00343 ATGGCTTCCTCTACTGCAATCCAGGTTTCCTCTGCCAGGCACTGCACATATAACCGGAAGCAGAAATCTCTTGGCCTCCTTTGCACTAATTTCTTGAGCTTGTATAATCATGACGGCATCCACTTGATTGGCCTTGATGATGCGGCAGCACGATTAGGGGTCGAGAGACGGCGAATCTATGACATAGTTAATGTATTGGAAAGTGTCGGGGTGCTTGCGAGAAAAGCCAAGAACCAGTATACTTGGAAAGGATTTGGGGCAATTCCTGGGGCTTTGCAGGAGCTTAAGGTGATCTCAAATTTGATTTTATTTCTGAATAGTGTGTCCGATGATGAGGATGACGAAGAAACATTATCCAATCCGAGTACTGGAAGTCAGAATGACAAGTCCAATCCTAATTCTGGTCTTATCAAATCCTTGAAGAATGAAAACCGAAGGGAAAAATCCCTGGCACTTCTAACTCAAAATTTTGTCAAGCTCTTTGTCTGCTCTAATGTGGAAATGATCTCCCTCGATGATGCTGCAAAGTTGTTGCTTGGGGATGCTCATAATACATCAATAATGAGAACAAAAGTCAGGCGTCTATATGATATTGCAAATGTGCTGTCTTCTATGAACCTAATTGAGAAGACTCATACATCGGACACAAGAAAGCCAGCATTCAAGTGGCTAGGTTTGACAGGAAAAACAGAGAGTGAATCTGCTCGCAATTCAAATCTTGATGAGTCCAGGAAAAGGATGTTTGGAGATGATGTCACAAACATTAACATTAAGAGGAGTAAAGTAGATTTTTTCATCAATGATGATTTAAACCAGAACCCTAAGATGCAAAATAAAGTGGACATTGGTAATTGGCTCGGTCAGGCAGATAAAATCTGTTCAAAACAAGAATCAAAACAGAATTCAAGGAGTTATCAGTTTGGTCCTTTTGCTCCCGCCTATGTGCCTAAAGCGAGTGCCTCTGACTTGGATAGCCTGGCAACTGCTTATCGTCCGCAATATCACAATCAAGGTAACATGTCGTGCTTTGCACATCACACTTGA 1044 0.4176 MASSTAIQVSSARHCTYNRKQKSLGLLCTNFLSLYNHDGIHLIGLDDAAARLGVERRRIYDIVNVLESVGVLARKAKNQYTWKGFGAIPGALQELKVISNLILFLNSVSDDEDDEETLSNPSTGSQNDKSNPNSGLIKSLKNENRREKSLALLTQNFVKLFVCSNVEMISLDDAAKLLLGDAHNTSIMRTKVRRLYDIANVLSSMNLIEKTHTSDTRKPAFKWLGLTGKTESESARNSNLDESRKRMFGDDVTNINIKRSKVDFFINDDLNQNPKMQNKVDIGNWLGQADKICSKQESKQNSRSYQFGPFAPAYVPKASASDLDSLATAYRPQYHNQGNMSCFAHHT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00343 347 SUPERFAMILY "Winged helix" DNA-binding domain 18 82 IPR036390 -
Bach5g00343 347 PANTHER TRANSCRIPTION FACTOR E2F 12 334 IPR015633 GO:0000978|GO:0006357
Bach5g00343 347 FunFam E2F transcription factor-like E2FE 140 227 - -
Bach5g00343 347 SUPERFAMILY "Winged helix" DNA-binding domain 147 226 IPR036390 -
Bach5g00343 347 MobiDBLite consensus disorder prediction 119 137 - -
Bach5g00343 347 FunFam E2F transcription factor 8 14 86 - -
Bach5g00343 347 MobiDBLite consensus disorder prediction 113 137 - -
Bach5g00343 347 Pfam E2F/DP family winged-helix DNA-binding domain 147 225 IPR003316 GO:0005667|GO:0006355
Bach5g00343 347 Pfam E2F/DP family winged-helix DNA-binding domain 20 84 IPR003316 GO:0005667|GO:0006355
Bach5g00343 347 Gene3D - 140 227 IPR036388 -
Bach5g00343 347 Gene3D - 14 87 IPR036388 -
Bach5g00343 347 SMART E2F_TDP_2 145 225 IPR003316 GO:0005667|GO:0006355
Bach5g00343 347 SMART E2F_TDP_2 19 84 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00343 Bach-Chr5 2400139 2402346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00343 14 346 E2F-DP Transcription Factor Family AT3G48160 55.932 5.57e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach5g00343 E2F_TDP 1.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00343 K09391 - qsa:O6P43_030916 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00343 5 2400139 2402346 Bach2g02085 2 28139639 28142346 BWGD
Bach5g00343 5 2400139 2402346 Bach5g00343 5 2400139 2402346 ECH