Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00339 CTTAAGCATAAAGAAAGTAGAAAAACCAGCGAATAGTTTTGAATATTGCAATAAATATGGGTGGCAATCGCAAGTACAGGTGGAAATTCTCTTTCCATCGTTCTTCATCCAACTCAAAGCTGGATTTGAAGCAACCACCAAAGGAGTTTATATGCCCAATCTCTGGGGTTTTAATGTCGGACCCAGTAGTTGTCGCTTCGGGTCAGACCTTCGAACGGGTTGCTGTTCAAGTGTGCAAAGACTTGAACTTCTCCCCGAAGCTGGAGGACGGGTCCAGACCCAATTTCTCTGCGATGATTTCCAATAATGCCTTCAGAACGACGATAATCCACTGGTGCGACCAATCGGGAATGGAGCACCCTCGCGCACCCGACTACAGTTCCGTGGAGAGGGTAGTCCGTGCAGCAATGGCGTCACAGCCCGAAGTAAAAGTTTCAGAAAGCGAATTGCTCGAGGGTGTGGCTGATAACCCAGCGGTAATTTTCTCTCACGCTGCGACCGAGTTGGGTCCCCGGGTCACCCACTTCAACTCGAGCTCATCCGAGGAATCGGTAATTATTGCGGCGAGTCCAGGAACCCCTCTGCCTTTCACGATTCGTCCCAGCTGTTACTCTTCGTCGTCGTCTACTTCGGAAATCACAGAGACTGATATCCAAAACCCTAGTGGTCCAGCTTCAGAGGAAGAGGACAAATTGGTTACGAAATTCAGGAGCGAGGAAGTGTTTGAGCAAGAAGAAGCCGTAATTTCACTGAGAAATATGACAAGGAACAGAGAGGACACCAGGGTCTCCCTCTGCTCCCTTCGACTGCTCTCTGCCTTGCGACCCTTGATCGTCTCCAGGTACTCCGTTGTTCAAGTAAACGCCGTCGCTTCTTTGGTCAACCTTTCGCTGGAAAAATCCAATAAGGTGAAGATCGTAAGGTCAGGATTCATTCCCTTTCTTATTGACGTGTTGAAAGGGGGATTCCCTGAGTCGCAGGAACACGCAGCAGGTGCGCTATTTAGCTTAGCCTTAGATGATGATAACAAAATGGCTCTTGGTGTTCTTGGCGCATTGCAGCCATTGATGCACGCGTTGAGGTCCGAGTCGGAAAGGACCCAGCACGACTCGGCGCTCGCGTTGTACCATTTGACCTTAGTACAAAGCAACCGGGTCAAACTCGTAAAACTCGGTGCGGTGCCCACGCTACTAACGATGGTGAGATCGGGGAACTCGACGAGCAGGGTTTTGCTAATTCTGTGTAATCTTGCGGTGTGTAACGAGGGGCGTACGTCGATGCTCGACAGTAATGCGGTGGAGTGCTTGGTAGGGTTGCTGAGGAGGAGAGAGTTAGACTCGGAGGCGACTCGGGAGAACTGTGTGGCTGCATTGAATGCTCTTAGCCAAGCGAGATTGAGGTTCAAAGGATTGGCAAAGGAGGCAAGGGCAGTGGAAGTGTTAAAGGAGATTGAAGAGAAAGGAACAGAGAGGGCCAGAGAGAAGGCCAAGAGAATATTGCAGATGATGAGGGCAGCAGGAGAAGGAGAAGATGAAGACGGAGTCGATTTCGATGGGATTTCGGGAACTAGTGGATTAAATCGAAACCGATTTCGAGTTGGGGGCAGAAACTCTAATATCCCCAACACGACCACATTTTAGATGGGTGGCAATCGCAAGTACAGGTGGAAATTCTCTTTCCATCGTTCTTCATCCAACTCAAAGCTGGATTTGAAGCAACCACCAAAGGAGTTTATATGCCCAATCTCTGGGGTTTTAATGTCGGACCCAGTAGTTGTCGCTTCGGGTCAGACCTTCGAACGGGTTGCTGTTCAAGTGTGCAAAGACTTGAACTTCTCCCCGAAGCTGGAGGACGGGTCCAGACCCAATTTCTCTGCGATGATTTCCAATAATGCCTTCAGAACGACGATAATCCACTGGTGCGACCAATCGGGAATGGAGCACCCTCGCGCACCCGACTACAGTTCCGTGGAGAGGGTAGTCCGTGCAGCAATGGCGTCACAGCCCGAAGTAAAAGTTTCAGAAAGCGAATTGCTCGAGGGTGTGGCTGATAACCCAGCGGTAATTTTCTCTCACGCTGCGACCGAGTTGGGTCCCCGGGTCACCCACTTCAACTCGAGCTCATCCGAGGAATCGGTAATTATTGCGGCGAGTCCAGGAACCCCTCTGCCTTTCACGATTCGTCCCAGCTGTTACTCTTCGTCGTCGTCTACTTCGGAAATCACAGAGACTGATATCCAAAACCCTAGTGGTCCAGCTTCAGAGGAAGAGGACAAATTGGTTACGAAATTCAGGAGCGAGGAAGTGTTTGAGCAAGAAGAAGCCGTAATTTCACTGAGAAATATGACAAGGAACAGAGAGGACACCAGGGTCTCCCTCTGCTCCCTTCGACTGCTCTCTGCCTTGCGACCCTTGATCGTCTCCAGGTACTCCGTTGTTCAAGTAAACGCCGTCGCTTCTTTGGTCAACCTTTCGCTGGAAAAATCCAATAAGGTGAAGATCGTAAGGTCAGGATTCATTCCCTTTCTTATTGACGTGTTGAAAGGGGGATTCCCTGAGTCGCAGGAACACGCAGCAGGTGCGCTATTTAGCTTAGCCTTAGATGATGATAACAAAATGGCTCTTGGTGTTCTTGGCGCATTGCAGCCATTGATGCACGCGTTGAGGTCCGAGTCGGAAAGGACCCAGCACGACTCGGCGCTCGCGTTGTACCATTTGACCTTAGTACAAAGCAACCGGGTCAAACTCGTAAAACTCGGTGCGGTGCCCACGCTACTAACGATGGTGAGATCGGGGAACTCGACGAGCAGGGTTTTGCTAATTCTGTGTAATCTTGCGGTGTGTAACGAGGGGCGTACGTCGATGCTCGACAGTAATGCGGTGGAGTGCTTGGTAGGGTTGCTGAGGAGGAGAGAGTTAGACTCGGAGGCGACTCGGGAGAACTGTGTGGCTGCATTGAATGCTCTTAGCCAAGCGAGATTGAGGTTCAAAGGATTGGCAAAGGAGGCAAGGGCAGTGGAAGTGTTAAAGGAGATTGAAGAGAAAGGAACAGAGAGGGCCAGAGAGAAGGCCAAGAGAATATTGCAGATGATGAGGGCAGCAGGAGAAGGAGAAGATGAAGACGGAGTCGATTTCGATGGGATTTCGGGAACTAGTGGATTAAATCGAAACCGATTTCGAGTTGGGGGCAGAAACTCTAATATCCCCAACACGACCACATTTTAGATTTATTTTTTTAATGTTGATTTGCTCGGACAGTTTAATTTGTTGGTTCAGTAGGAAGGGTGTAATTACCAGTAGTGAGTTACTGGGATTGTGAGTTTGGGTTTGGGATGTAGATCAGTGGCGGAACATTTCATGCTTACCGATTTACCATTCTCATTTTTTTTTGGTCTGTATGGGTTGTATGTGAAAATGTGTACATAATTAGAAGACTACCTTTCTATTTTGGTACACAAGAAAAGCATGATTAGTGATAAAAGAAAAGGAATGATTGGTAATTTA 3503 0.4896 MGGNRKYRWKFSFHRSSSNSKLDLKQPPKEFICPISGVLMSDPVVVASGQTFERVAVQVCKDLNFSPKLEDGSRPNFSAMISNNAFRTTIIHWCDQSGMEHPRAPDYSSVERVVRAAMASQPEVKVSESELLEGVADNPAVIFSHAATELGPRVTHFNSSSSEESVIIAASPGTPLPFTIRPSCYSSSSSTSEITETDIQNPSGPASEEEDKLVTKFRSEEVFEQEEAVISLRNMTRNREDTRVSLCSLRLLSALRPLIVSRYSVVQVNAVASLVNLSLEKSNKVKIVRSGFIPFLIDVLKGGFPESQEHAAGALFSLALDDDNKMALGVLGALQPLMHALRSESERTQHDSALALYHLTLVQSNRVKLVKLGAVPTLLTMVRSGNSTSRVLLILCNLAVCNEGRTSMLDSNAVECLVGLLRRRELDSEATRENCVAALNALSQARLRFKGLAKEARAVEVLKEIEEKGTERAREKAKRILQMMRAAGEGEDEDGVDFDGISGTSGLNRNRFRVGGRNSNIPNTTTF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00339 527 MobiDBLite consensus disorder prediction 187 204 - -
Bach5g00339 527 ProSiteProfiles U-box domain profile. 26 100 IPR003613 GO:0004842|GO:0016567
Bach5g00339 527 FunFam RING-type E3 ubiquitin transferase 208 484 - -
Bach5g00339 527 Gene3D - 207 486 IPR011989 -
Bach5g00339 527 FunFam RING-type E3 ubiquitin transferase 9 101 - -
Bach5g00339 527 Pfam U-box domain 28 94 IPR003613 GO:0004842|GO:0016567
Bach5g00339 527 SUPERFAMILY ARM repeat 212 484 IPR016024 -
Bach5g00339 527 PANTHER U BOX DOMAIN-CONTAINING 23 485 - -
Bach5g00339 527 Pfam Armadillo/beta-catenin-like repeat 321 360 IPR000225 GO:0005515
Bach5g00339 527 SUPERFAMILY RING/U-box 13 103 - -
Bach5g00339 527 SMART Ubox_2 30 93 IPR003613 GO:0004842|GO:0016567
Bach5g00339 527 SMART arm_5 280 320 IPR000225 GO:0005515
Bach5g00339 527 SMART arm_5 321 361 IPR000225 GO:0005515
Bach5g00339 527 SMART arm_5 401 444 IPR000225 GO:0005515
Bach5g00339 527 MobiDBLite consensus disorder prediction 187 208 - -
Bach5g00339 527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 101 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00339 Bach-Chr5 2371236 2373154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00339 1 518 U-box Gene Family AT5G65200 57.692 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00339 - - qsa:O6P43_022750 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00339 5 2371236 2373154 Bach5g00339 5 2371236 2373154 ECH