Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00318 ATGAATTCAATGAATCATAAACTCAATCAAAGAGATCGTCGTATCCTTTCATTTCCGGCAGTGCATCCTTGCGAAGGCGTATCTCCGGCCGCCCTTGTGACCTCTTTGATTACTCTATCGCACAAGATATGTAGTTTCCAATCCAAGTTGTTTCCCACCCAACGACAAAATGCCAGAGAAACAATACGCCAAATTGGTATCATTCTTATATTCCTGGAGGAAATTCGAGAGCGCGGTATGATGATCCCGGACTCTGCCGTTCTTTGCTTCTCGGAGCTCCACATCAGCTTTCAAAAAATTCTCTTGTTAATGGAAGACTGTACTCGGGAAGGTGCTCGCCTTTGGATGCTAATGAAGTCTCAATCGGTCGCCACCCAGTTTCGGCATCTAATTCGTTTGGTAGCCACTGCTCTTGACGTTCTGCCCTTGTATCTCATTGAGGTTTGTGGTGAAGTGAAGGAGTTAGTGGAGTTAGTAGCCAAGCAAGCTCGGAAAGTGAAGTTCGAAGTCCACCCAGCTGACGAAAGAACGAGCAAATTGGTTCATTTGGTTTTGCATCAGTTTGAGAGGGGAACCGAACCCGATTCGAGTACTATGAAGCGAATCCTTGATTACCTCGAAATTAAGAGCTGGGCTGACTGTAACCAAGAGATCAGATTCTTAGAAGATGAAATTAGTTTCCAGTGCTCTGACTGTGATGAAAGAGAGCTCCCATTTTTGAGCGATTTGGTCGGGTTCTTAAACTACTCTAGGGGAGTGATATTTGATACTCTGGATTTTAGTTTACGCAACGCTACGGATCAATCAGAAGGTAGGTGCAGCACAGAGATTTATACTTGCATAAATCCAGAGGATTTTCGGTGCCCAATTTCCCTGGAGCTAATGACCGATCCCGTCACGGTATCCACTGGCCAAACTTACGATCGAGCTTCTATTCAGAAATGGTTCAAAGCTGGAAATGCGATATGCCCCAAAACAGGGGAGAAGCTAACAAGCACAGACTTAGTCCCAAACACAACACTCAAGAACCTTATCCAACAGTTCTGTGCTGATAATGGCATTTCCCTAACAAAGTCCGGTAACCGGAGTCGTGACATTTCGAGGACCATCGTCCCAGGAAGTCCAGCGGCAGCGCAAGCCATGCAATTTCTTTCTTGGTTTCTTGCTCGAAGGCTTGTGTTTGGAACACGAGAGCAGCAAAACAAAGCTGCTTATGAGATTCGTTTGCTTGCAAGGTCTAACATTTTCAATAGGGCTTGTTTGATTCAAGTGGGCACAGTGTCACCTCTACTAAATCTTTTGGATATGGATGGTAAATCCTTGCAAGAGAACGCAATCGCTGCTTTGTTGAAGCTCGCAAAGCATAATGATGGCAAGGAAATGATCGTCGAAAGTGGAGGTCTAACGCAGGTCCTTATGGTTCTCAAAAGTGGGCTAAGTTTGGAAGCTCGGCAAAGCGCAGCTGCCATTGTATTTTATCTTTGTTCGGTGAAAGAGAACAGGAAATTGATAGGAGAACACCCCGAGGCAATTCTAGCGTTGGTGGAGTTGCTCAAGGAAGGAACAACTCTGGGAAAAAAGAATGCTGTGGTTGCCATTTTCGGGCTGCTATTACTTCCCAAGAACCATCAGAGGGTGCTTGCAGCTGGGGTTGTTCCTGCGCTACTTGATATTTTAGCTACCTCACAAAGGGCTGACCTTGTCACCGATTCTTTAGCAGTTCTTGCAGCCTTGGCCGAGAGTGTTGAGGGATCATATGCTATTTCACAAGCCTCGCCTTTGCCTTTAATCATTGGGATTTTGCAGTCTTCAACATCCCGTGCAGGGAAAGAGCACTGTGTTTCAATTTTGCAGTCTCTGTGCGTGAATGTCGGTGCAGAGGTGATGGGTGTTCTGGCTAAGGACCCTTCCCTAATGCCTTCGCTTTACTCACTTGTCACTGATGGTACTTCTCATGCAACCAAGAAAGCACGTTCCCTCATCAAAATTATACTTGAATTCAACCAAGCTACCAGTTCTAGATTCATGGGTTCGTCAGTTGCACAAGAACGATCCCTTCACGTTTGGTGA 2070 0.4565 MNSMNHKLNQRDRRILSFPAVHPCEGVSPAALVTSLITLSHKICSFQSKLFPTQRQNARETIRQIGIILIFLEEIRERGMMIPDSAVLCFSELHISFQKILLLMEDCTREGARLWMLMKSQSVATQFRHLIRLVATALDVLPLYLIEVCGEVKELVELVAKQARKVKFEVHPADERTSKLVHLVLHQFERGTEPDSSTMKRILDYLEIKSWADCNQEIRFLEDEISFQCSDCDERELPFLSDLVGFLNYSRGVIFDTLDFSLRNATDQSEGRCSTEIYTCINPEDFRCPISLELMTDPVTVSTGQTYDRASIQKWFKAGNAICPKTGEKLTSTDLVPNTTLKNLIQQFCADNGISLTKSGNRSRDISRTIVPGSPAAAQAMQFLSWFLARRLVFGTREQQNKAAYEIRLLARSNIFNRACLIQVGTVSPLLNLLDMDGKSLQENAIAALLKLAKHNDGKEMIVESGGLTQVLMVLKSGLSLEARQSAAAIVFYLCSVKENRKLIGEHPEAILALVELLKEGTTLGKKNAVVAIFGLLLLPKNHQRVLAAGVVPALLDILATSQRADLVTDSLAVLAALAESVEGSYAISQASPLPLIIGILQSSTSRAGKEHCVSILQSLCVNVGAEVMGVLAKDPSLMPSLYSLVTDGTSHATKKARSLIKIILEFNQATSSRFMGSSVAQERSLHVW 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00318 689 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 356 IPR013083 -
Bach5g00318 689 SUPERFAMILY ARM repeat 396 668 IPR016024 -
Bach5g00318 689 Gene3D - 389 536 IPR011989 -
Bach5g00318 689 PANTHER U BOX DOMAIN-CONTAINING 83 663 - -
Bach5g00318 689 ProSiteProfiles U-box domain profile. 281 355 IPR003613 GO:0004842|GO:0016567
Bach5g00318 689 Gene3D - 537 681 IPR011989 -
Bach5g00318 689 Pfam U-box domain 283 352 IPR003613 GO:0004842|GO:0016567
Bach5g00318 689 FunFam RING-type E3 ubiquitin transferase 281 356 - -
Bach5g00318 689 SUPERFAMILY RING/U-box 282 355 - -
Bach5g00318 689 CDD RING-Ubox_PUB 283 335 IPR045210 -
Bach5g00318 689 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 425 467 IPR000225 GO:0005515
Bach5g00318 689 SMART Ubox_2 285 348 IPR003613 GO:0004842|GO:0016567
Bach5g00318 689 FunFam RING-type E3 ubiquitin transferase 362 675 - -
Bach5g00318 689 SMART arm_5 413 454 IPR000225 GO:0005515
Bach5g00318 689 SMART arm_5 539 580 IPR000225 GO:0005515
Bach5g00318 689 SMART arm_5 455 496 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00318 Bach-Chr5 2238795 2240864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00318 4 689 U-box Gene Family AT1G60190 41.117 6.98e-171 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00318 - - qsa:O6P43_022729 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00318 5 2238795 2240864 Bach5g00318 5 2238795 2240864 ECH