LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach5g00316	AAGAGAAGCACAACATCAGCGACAATTGAACACCCTCACCGTATCTGGCAAGATAGATAGCTTACCAAATTCGTTGTTCTCTGCTATACAGATAGAAACAGGGGAGAAAGACTGAAGTAGAAGGAGCAAAGATGAAGGAGAGTGGTGATGGGTTTGTGAGGGCCGATCAGATTGATCTCAAGACCATTGATGAACAGCTCGAGAGGCATCTAAACAAGGTTTTGATTATGGAGAAGAATAAGAGGAAAGAGGAAGATGCGGATACTATCACTGCTACTACTATTAAAATTACTGGTAGTGGTGGCGCTACCTTCAAGAAGCAAAGGCAGGAGTGGGAGATTGACCCTTCCAAGCTAATCATCAAGAGTGTTATAGCTCGTGGCGCTTTCGGCACTGTCCACCGTGCTGTCTATGATGGCCAAGATGTCGCTGTTAAATTGTTGGACTGGGGTGAAGAGGGCCAAAGGTCGGAAGGTGAAATTGCTTCACTGAGGGCAGCCTTTATACAAGAAGTGGCCGTTTGGCATAAACTGAATCATCCCAATGTCACTAAGTTTATAGGGGCAACAATGGGGTCGACAGAACTACAGATACAAACAGATGGTGGTCTAATTAGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTCCCTGGTGGTACTCTGAAATCTTACCTAATAAAAAACAGGAGAAGGAAGTTAGCATTCAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAAATTGTCCACAGAGATGTGAAGACAGAGAACATGTTGTTGGATAAGACTCGTACAGTTAAAATTGCCGACTTTGGGGTAGCACGTGTTGAGGCTTCAAATCCTAATGACATGACTGGGGAGACCGGTACTCTTGGTTACATGGCTCCAGAGGTTTTAAATGGCAACCCCTATAACAGGAAGTGTGATGTATACAGTTTTGGTATCTGTTCATGGGAGATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGGTTACTTCAGCAGTTGTTCGCCAGAATCTGAGACCAGATATACCAAGATGTTGCCCAAGTTCTCTAGCAAATGTAATGAAGAGATGTTGGGATGCCAATCCTGATAAACGACCAGAGATGGATGAGGTAGTTTCTATGTTAGAGGCCATTGACACATCAAAAGGTGGAGGTATGATCCCTGTCGATCAGGCTCAGGGCTGTCTTTGCTTCCGCAATTATAAAGGGCCTTAA	1268	0.4432	MKESGDGFVRADQIDLKTIDEQLERHLNKVLIMEKNKRKEEDADTITATTIKITGSGGATFKKQRQEWEIDPSKLIIKSVIARGAFGTVHRAVYDGQDVAVKLLDWGEEGQRSEGEIASLRAAFIQEVAVWHKLNHPNVTKFIGATMGSTELQIQTDGGLISMPSNVCCVVVEYLPGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICSWEIYCCDMPYPDLSFSEVTSAVVRQNLRPDIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRNYKGP	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach5g00316	378	ProSiteProfiles	Protein kinase domain profile.	75	352	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g00316	378	Gene3D	Transferase(Phosphotransferase) domain 1	175	365	-	-
	Bach5g00316	378	Gene3D	Phosphorylase Kinase; domain 1	63	157	-	-
	Bach5g00316	378	FunFam	Kinase suppressor of Ras 1	64	158	-	-
	Bach5g00316	378	SMART	serkin_6	75	352	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach5g00316	378	Pfam	Protein tyrosine and serine/threonine kinase	77	349	IPR001245	GO:0004672\|GO:0006468
	Bach5g00316	378	FunFam	Serine/threonine-protein kinase HT1	175	360	-	-
	Bach5g00316	378	PRINTS	Tyrosine kinase catalytic domain signature	320	342	IPR001245	GO:0004672\|GO:0006468
	Bach5g00316	378	PRINTS	Tyrosine kinase catalytic domain signature	276	298	IPR001245	GO:0004672\|GO:0006468
	Bach5g00316	378	PRINTS	Tyrosine kinase catalytic domain signature	210	228	IPR001245	GO:0004672\|GO:0006468
	Bach5g00316	378	PRINTS	Tyrosine kinase catalytic domain signature	172	185	IPR001245	GO:0004672\|GO:0006468
	Bach5g00316	378	SUPERFAMILY	Protein kinase-like (PK-like)	61	349	IPR011009	-
	Bach5g00316	378	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	67	352	-	-
	Bach5g00316	378	CDD	STKc_MAP3K-like	81	349	-	-
	Bach5g00316	378	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	216	228	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach5g00316	Bach-Chr5	2229809	2232926	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach5g00316	1	310	MAP Kinase Kinase Kinase	AT5G50000	79.811	0.0	537

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Bach5g00316		PK_Tyr_Ser-Thr	9.7e-63	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach5g00316	-		-	qsa:O6P43_022726	678.707