Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00307 ATGGATCTTGAGACAAAGCTTAGAGAAAACTATGCCTCACAGTCACAGCCAATGCATTTGCAAGAACATTACTTGAAAGCTAACATGAGAGACGAGCTTCCTTTGGGGGTTCCTTCATCTCAGGGTTTTTTGCAAGATTTCCACCATATTGATCATCAATTTCATGTTAATGGGTCTTCATCAAACCAACCTTTCGCGGTCCAAATTCCAAGTTTTGATCCTTCTGATACTTTCAACTATGGCTGTTCTTCTGCAGATTTTGATGTTTATGAGTGCAAACCCTTTGCTGAAAATAATGGCACTGGCCAAACCCAAGTCATGGACAATTTCCAATATGGAAGCCATGACTTGAACCTCCCTCAGAAGAATAATCAAGCGGATATCATTGGTGGAAACCAAAGTTGTGTGCCCTTTGATTCTCAAGAAATAATCAAGCCCATCAATTTTGTTATACCAGATGAACTCTCCTGCATATCACCAGCAAATTATTACAAAAAAGTCGGCTTGAACAAGAATAATAGGGCATCTTCTACAATTGCTAGAAGGACATACAAAGTCCGGAACAAGTCCAGCATAGTGAAAGGGCAGTGGACGGTTGATGAAGATAGGCTGTTGACTCAGCTGGTTGACCGATATGGAGTGAGGAAGTGGTCTCATATTGCTCAGATGTTGCCTGGAAGAATAGGCAAACAGTGTAGAGAGCGATGGCATAACCATCTCAGGCCTGACATTAAGAAGGATTCATGGACTGATGAAGAGGATAAAATACTTATCCAAGCCCATGCAGAGATAGGAAATAAATGGGCAGAGATTGCCAAAATGTTGCCTGGGAGAACTGAGAATTCAATCAAAAACCATTGGAATGCAACCAAGAGAAGACAAAATTCCAAGAGAAAATGTCGCTCAAAGTATCCTAGAGGCTCTCTTCTGCAGGAATATATCAAGAGCTTGAACTTAGACCAAAACCCACCAATAGACTACAGGAAAAAATCTTCTGCAAAAGCCACCACAAGCACAAGCAAAGCAGCAGCAGCAGCAGCAACTCAACCCCAAATTGCAGATCAGTTTTGTCCCGATGACCGATTGGTACCAAATTATGATTTCAACTATGTCCCGGATTTTACCTTGGATGAGAACTTGTTTCAAGAGGGATGTAACATTGATTCTCTACTGGATGATATGCCTTGTGCTCCAACTATAGATCATGAAAAAGACTTTGAAGGAGCAAAAATGCCTCTTGTTAATGTTGGTGAGCATCATTTTGAGATGGGCATGGCACAGGATGTGGCACCAACGTTGGGTGGTGCTCAAGTTAAGAAGGAACTCGATTTGGTCGAGATGATGTCTCAGGTCAATGAAGTGGTCAATGTTTAA 1374 0.4163 MDLETKLRENYASQSQPMHLQEHYLKANMRDELPLGVPSSQGFLQDFHHIDHQFHVNGSSSNQPFAVQIPSFDPSDTFNYGCSSADFDVYECKPFAENNGTGQTQVMDNFQYGSHDLNLPQKNNQADIIGGNQSCVPFDSQEIIKPINFVIPDELSCISPANYYKKVGLNKNNRASSTIARRTYKVRNKSSIVKGQWTVDEDRLLTQLVDRYGVRKWSHIAQMLPGRIGKQCRERWHNHLRPDIKKDSWTDEEDKILIQAHAEIGNKWAEIAKMLPGRTENSIKNHWNATKRRQNSKRKCRSKYPRGSLLQEYIKSLNLDQNPPIDYRKKSSAKATTSTSKAAAAAATQPQIADQFCPDDRLVPNYDFNYVPDFTLDENLFQEGCNIDSLLDDMPCAPTIDHEKDFEGAKMPLVNVGEHHFEMGMAQDVAPTLGGAQVKKELDLVEMMSQVNEVVNV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00307 457 SMART sant 245 293 IPR001005 -
Bach5g00307 457 SMART sant 193 242 IPR001005 -
Bach5g00307 457 Gene3D - 193 245 - -
Bach5g00307 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 189 244 IPR017930 -
Bach5g00307 457 Gene3D - 247 300 - -
Bach5g00307 457 SUPERFAMILY Homeodomain-like 192 287 IPR009057 -
Bach5g00307 457 CDD SANT 248 291 IPR001005 -
Bach5g00307 457 Pfam Myb-like DNA-binding domain 194 240 IPR001005 -
Bach5g00307 457 Pfam Myb-like DNA-binding domain 246 288 IPR001005 -
Bach5g00307 457 PANTHER MYB PROTEIN-RELATED 170 336 - -
Bach5g00307 457 CDD SANT 197 240 IPR001005 -
Bach5g00307 457 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Bach5g00307 457 ProSiteProfiles Myb-like domain profile. 189 240 IPR001005 -
Bach5g00307 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 295 IPR017930 -
Bach5g00307 457 FunFam Transcriptional activator Myb isoform A 193 246 - -
Bach5g00307 457 FunFam Transcription factor MYB119 247 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00307 Bach-Chr5 2154638 2156220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00307 88 401 MYB Transcription Factor Family AT4G18770 50.760 1.32e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g00307 Myb_DNA-binding 4.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00307 K09422 - gmx:100816653 598.201