Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00299 ATGCACAAAGCAAAGTTGGGGTCACTGACTGCTTGCGGAGACTCCACTTCATCTGGTGATCCGGCCGGCGACTCAGTCTCAGAAATGGAGAAGCAGTACGGTTTCCACCGCACCGCCGGTTCTTCAATGCCTCTACAATTACCTCCAACGACCGCTGATCAACACGTCATTCCATTAAATTGGATTCCAGTTCCAGGACCCCAACAACTTGCTTCTTATTCATCGGATGCTGCCGTGACATCGCCACCCTTGGCTGTGGCTGAGGCTGAGGCTAGCTTGGAGTTGCAAGAGCAGGATCACCTATCTAAAACACTTGCGGCTAAAATAGTTTCCCATCCTTCGTATCCTAAACTCCTGGATGCCTATATTGATTTGCACAAGGTGGGAGCGCCGCCGGAGATGGCGGAACTATTAAATGAAACCGGAGGCGAGACTAGCGGTTTCTGTCAGGAATCTACTTGCTTGGGTGCTGATCATGAGCTTGACAATTTCATGGAACTGTATTGCGATCTATTGATGAAGTTTAAATTGGATCTGTCAAAGCCTTTTGACGAGGCAACCGCTTTTCTCAACGACATGGAAAAGCAGCTTAACTCCCTCTCTACCACAGACTACATTCCTGATGAAGCTACAGTATCATCTGAAGAGGATTTCAGTAAGGAAGAGAAAGATTCGAACGCGTGCAAGAGGGTATATGAAGATAGAGAGCTGAAGGATAAGCTTCTACGTAGATATAGCGGTTATATAAGTAACCTAAAGCATGAATTTTCCAAGAAGAAGAAGAAAGAAAAGCTACCAAAAGAAGCAACGCAAATCTTACTTGCCTGGTGGAATATTCACTTCAAATGGCCATACCCAACTGAAGCGGATAAGGTTGCCCTAGCTGAATTGACAGGTCTTGATCAGAAGCAGATAAACAATTGGTTTATAAACCAAAGAAAGCGCCACTGGAAACCAACAGAGGAGATGCAAGCTGCTGTCCTTGAAGGTCTCTATGGACCTTTCTACACCAGTGACTAATTTAAGGTGGGAGCTCCTCAATGTTTCCTCTTGTATAGTCTGTGCACTCCGCGCACCCTTGGCGGAATATCATTGTTGAAATTCGTTTCTACATTCTCTAACAGCTTTATATTATAGTAGCTATGCATGCTGCTAATCTGTTT 1163 0.4514 MHKAKLGSLTACGDSTSSGDPAGDSVSEMEKQYGFHRTAGSSMPLQLPPTTADQHVIPLNWIPVPGPQQLASYSSDAAVTSPPLAVAEAEASLELQEQDHLSKTLAAKIVSHPSYPKLLDAYIDLHKVGAPPEMAELLNETGGETSGFCQESTCLGADHELDNFMELYCDLLMKFKLDLSKPFDEATAFLNDMEKQLNSLSTTDYIPDEATVSSEEDFSKEEKDSNACKRVYEDRELKDKLLRRYSGYISNLKHEFSKKKKKEKLPKEATQILLAWWNIHFKWPYPTEADKVALAELTGLDQKQINNWFINQRKRHWKPTEEMQAAVLEGLYGPFYTSD 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00299 339 CDD homeodomain 270 319 IPR001356 GO:0003677
Bach5g00299 339 SMART KNOX1_2 103 147 IPR005540 GO:0003677|GO:0005634
Bach5g00299 339 SMART KNOX2_2 151 202 IPR005541 GO:0003677|GO:0005634
Bach5g00299 339 MobiDBLite consensus disorder prediction 1 27 - -
Bach5g00299 339 SUPERFAMILY Homeodomain-like 257 327 IPR009057 -
Bach5g00299 339 ProSiteProfiles 'Homeobox' domain profile. 256 319 IPR001356 GO:0003677
Bach5g00299 339 Pfam KNOX2 domain 155 200 IPR005541 GO:0003677|GO:0005634
Bach5g00299 339 Pfam KNOX1 domain 107 144 IPR005540 GO:0003677|GO:0005634
Bach5g00299 339 Pfam Homeobox KN domain 276 315 IPR008422 GO:0003677|GO:0006355
Bach5g00299 339 Pfam ELK domain 236 257 IPR005539 GO:0003677
Bach5g00299 339 ProSiteProfiles ELK domain profile. 236 256 IPR005539 GO:0003677
Bach5g00299 339 SMART ELK_2 236 257 IPR005539 GO:0003677
Bach5g00299 339 SMART HOX_1 258 323 IPR001356 GO:0003677
Bach5g00299 339 ProSitePatterns 'Homeobox' domain signature. 294 317 IPR017970 GO:0000981|GO:0006355
Bach5g00299 339 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 143 325 - -
Bach5g00299 339 Gene3D - 253 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00299 Bach-Chr5 2090649 2096326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00299 70 337 Homeobox Transcription Factor Family AT1G23380 52.158 3.19e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Bach5g00299 KNOX2 4.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00299 - - qsa:O6P43_022694 341.273