Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00288 ATGGCATCATCCAGCTCTTACAATTCTCCCTGTGCAGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGGTTGCATCTTTGCACCTTACTTCCCACCTGAAGAGCCCCAAAAATTTGCCAACGTCCACAAAATTTTTGGTGCTAGCAATGTTACTAAGCTCCTCAATGAACTCCTCCCTCACCAGAGGGAGGATGCAGTGAATTCCCTTGCCTATGAAGCAGAGGCCCGCGTCAGAGACCCAGTTTATGGCTGTGTTGGTGCTATCTCTTTTCTCCAAAGACAGGTTCAAAGGCTCCAGAAAGAGCTTGAAACTGCTAATGCTGATCTGCTCCGTTATGCCTGCAATGACATCCCTTCTGCATCTTTGCCTGTACCACCACCAATAACTTCAGTTCAACAAATTCCCCAAAGACAAAGGTCTATGGAGTTTAGCGGAAGAATTGGTAATGAAGGGGGTGGGTTTTATCGTCAAACTCCTACTACTTATGTTCTTCCTTATTCTCTTCCATGGACTGATACCTCTCCAGAGGATATTAACGAGGGAGGAGGAGGAGGAGGTAATTTGTGA 570 0.4632 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELETANADLLRYACNDIPSASLPVPPPITSVQQIPQRQRSMEFSGRIGNEGGGFYRQTPTTYVLPYSLPWTDTSPEDINEGGGGGGNL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00288 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bach5g00288 189 Coils Coil 89 116 - -
Bach5g00288 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 133 - -
Bach5g00288 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00288 Bach-Chr5 1997252 1997821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00288 1 113 AS2 family AT5G63090 92.982 5.88e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach5g00288 LOB 2.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00288 - - pvy:116142270 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00288 5 1997252 1997821 Bach2g02169 2 28713730 28714302 BWGD
Bach5g00288 5 1997252 1997821 Bach2g02169 2 28713730 28714302 ECH
Bach5g00288 5 1997252 1997821 Bach5g00288 5 1997252 1997821 ECH