Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00285 ATGGGTCGCCATTCCTGTTGTCTAAAGCAAAAACTGAGAAAAGGTCTATGGTCTCCTGATGAAGATGAGAAGCTATTCAATTACATAACCAGATATGGCGTTGGGTGCTGGAGTTCAGTTCCCAGACTAGCTGGGTTGCAAAGGTGTGGAAAGAGTTGCAGACTGAGATGGATTAACTATTTGAGGCCTGATTTGAAGAGAGGCATGTTCTCTCAACAGGAGGAGGATCTTATAATCAGTCTTCATGAAGTTCTTGGCAACAGGTGGGCTCAAATTGCAGCACAATTACCAGGAAGAACAGATAATGAGATTAAGAACTTCTGGAATTCATGTCTAAAGAAGAAGCTATTGAAGCAAGGGCTAGACCCAACAACCCACAAGCCTCTAACTGAAGCCCAAATAAAAGAGGAGAAGACAAATATAGAGACACCATCTATGCAAATACTATTTTCTCAAGGACTTCCAGCTGCAACAACCTCACAGGGTTCAGCACTTCTGTTCAGTGATTCCAATTTTTATGATGGTGGGCTAACAGAAGCTTCAAGAGAAGTTTTCATAAACAAGCCAGCTTTGGATCCACTGTCCTACTTTGGATTCCCAATGGGTGTTGCGCAATCCGATTATGATTCAAGTTTGAGTCATTATCACTCAGGTCTGAAACCATTTGATCAGGACCACTTGGGAACAAATTCAAGCTATGGATTCTCTTCAATGCCAAGTTTAACCAATTCTGATCACGGGAACATGTCAATGACAGAGTTTTCAGATAACAATTCAGCTTCAAAAATCAGTTCTTTGTTCATGAACGAGGTGAAAGAAAGCTCAAGCAATAGCTCAAATGTGAGCAATTATCCAATAGCAGGGTGTCAGATAAGCAATATGATGGAAAGTGCAGGATTCTCATGGGACGGCGAGAACAAGATGGATTCTTTGTTTCAGTTTGATCATGTCAATGCCATAAAATCTGAGGAAATCAAGACAAGTTCATGGCAGCAAGGGCAGTTTCAGACTCACAGTTCAATAGATTTCAATAGTTATCCATTAACGTCACTGTCAGAGGATCTAACAGGAGCGAATTTTGATGTATTCCAGCATATATGA 1101 0.4087 MGRHSCCLKQKLRKGLWSPDEDEKLFNYITRYGVGCWSSVPRLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGLDPTTHKPLTEAQIKEEKTNIETPSMQILFSQGLPAATTSQGSALLFSDSNFYDGGLTEASREVFINKPALDPLSYFGFPMGVAQSDYDSSLSHYHSGLKPFDQDHLGTNSSYGFSSMPSLTNSDHGNMSMTEFSDNNSASKISSLFMNEVKESSSNSSNVSNYPIAGCQISNMMESAGFSWDGENKMDSLFQFDHVNAIKSEEIKTSSWQQGQFQTHSSIDFNSYPLTSLSEDLTGANFDVFQHI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00285 366 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bach5g00285 366 SMART sant 66 114 IPR001005 -
Bach5g00285 366 SMART sant 13 63 IPR001005 -
Bach5g00285 366 CDD SANT 70 109 IPR001005 -
Bach5g00285 366 PANTHER MYB DOMAIN PROTEIN 55 1 302 - -
Bach5g00285 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach5g00285 366 CDD SANT 17 61 IPR001005 -
Bach5g00285 366 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach5g00285 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach5g00285 366 Gene3D - 11 67 - -
Bach5g00285 366 Gene3D - 69 143 - -
Bach5g00285 366 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach5g00285 366 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bach5g00285 366 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach5g00285 366 FunFam Transcription factor MYB86 69 137 - -
Bach5g00285 366 FunFam MYB transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00285 Bach-Chr5 1970266 1971626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00285 1 141 MYB Transcription Factor Family AT1G57560 76.596 7.12e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach5g00285 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00285 K09422 - gmx:100811140 577.4