Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00275 ATGGAGATCACCCAGCAAAATCCCCCAAACGATGAAATCTCTGTACAAAATGGCGTTGAGCTCCAACACGCAGCTCCTTCTCCTATGCTTTCCGAAGAGAAAATTCTCGTCTCTGTTGAGGTATGCTTAAAACCTTCGAGTACAGCTCGGATCGAGGATGTTCGTTTAGCCGTCGAGAGGATGCTTGAGAAGAGGAGTTTGAGCTATAATGATGGCCCCATTCCTGTGCCTCTTGATGACGCGTTTCTTGCAGAAAACGTGCAAAGAATCTCTATTTGTGATACAGATGACTGGGCAAACAACCATAGCGTTCTTTTGTTCTGGCAAGTCAAGCCTGTTGTGCAAGTCTTCCAGCTTAGTGAAGAGGGACCATGCGAGGATATAAGCGCTGATGGTCAACCTTCCAGCTTCAATGAATGGGTTCTTCCCGCAAAAGAATTTGATGGCATGTGGGAAAGCTTGATATATGAGTCTGGTCTCAAGCAAAGGTTGTTACGGTATGCAGCGAGTGCTTTACTCTTTACTGAAAAGGGCGTTGATCCATTTCTTGTTTCATGGAACCGTATTATTCTTTTACATGGACCCCCTGGGACTGGAAAGACGTCCTTATGTAAAGCATTAGCTCAGAAACTATCAATTCGATTAAATTCCAGATACCCACAGTGCCTGCTGGTTGAAGTTAATGCTCATTCTCTGTTCAGTAAATGGTTCTCTGAAAGTGGCAAGCTGGTTGCAAAGCTATTCCAAAAGATTCAAGAAATGGTAGAGGACGAAAATAATCTGGTATTTGTTTTAATTGATGAAGTGGAAAGCCTTGCTGCTGCTAGAAAAGTTGCTTTATCTGGTTCTGAACCTTCAGACTCTATACGGGTTGTGAATGCATTACTAACTCAGATAGACAAGTTGAAATCGTCGCCAAATGTCCTGATTCTAACTACATCGAATATAACCGCGGCTATTGATATTGCTTTTGTTGATCGAGCTGACATCAAAGCATACATTGGCCCTCCGACTCTTCAAGCTCGCTATGAAATTTTGAGGTCTTGCTTGCAGGAACTGATACGAACAGAGATCTTAACAGGTCCACAGGATTGTCGATATCTCATGCTTCCAAACTATGCTAGTTTAAAGGAGAGGTTGAACGCACCTGATGTTGATGAGGCCTCAATACCAATTCAACTGTGTAAACAACTGCTTGAAACAGCAGAGGCATGCAAGGCAATGAGCGGAAGGTCTTTGAGAAAGCTTCCATTCTTGGCACATGCTTCCCTTGCGAATCCTTTTGGCAGAGATCCTATAAAGTTCCTGTGTACCATGATAGAAACAGCAAAGAGGGAGCATTCTGAGCTTCCCGACTGA 1359 0.4356 MEITQQNPPNDEISVQNGVELQHAAPSPMLSEEKILVSVEVCLKPSSTARIEDVRLAVERMLEKRSLSYNDGPIPVPLDDAFLAENVQRISICDTDDWANNHSVLLFWQVKPVVQVFQLSEEGPCEDISADGQPSSFNEWVLPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRLNSRYPQCLLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEDENNLVFVLIDEVESLAAARKVALSGSEPSDSIRVVNALLTQIDKLKSSPNVLILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEILRSCLQELIRTEILTGPQDCRYLMLPNYASLKERLNAPDVDEASIPIQLCKQLLETAEACKAMSGRSLRKLPFLAHASLANPFGRDPIKFLCTMIETAKREHSELPD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00275 452 ProSitePatterns AAA-protein family signature. 308 327 IPR003960 GO:0005524|GO:0016887
Bach5g00275 452 SMART AAA_5 186 338 IPR003593 GO:0016887
Bach5g00275 452 Pfam ATPase family associated with various cellular activities (AAA) 190 335 IPR003959 GO:0005524|GO:0016887
Bach5g00275 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 353 IPR027417 -
Bach5g00275 452 CDD RecA-like_Pch2-like 136 334 - -
Bach5g00275 452 Gene3D - 134 353 IPR027417 -
Bach5g00275 452 FunFam pachytene checkpoint protein 2 homolog 130 352 - -
Bach5g00275 452 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 29 449 IPR044539 -
Bach5g00275 452 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 304 318 IPR001270 GO:0005524
Bach5g00275 452 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 190 208 IPR001270 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00275 Bach-Chr5 1904434 1908614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00275 133 353 Calmodulin-binding Proteins AT3G56690 30.531 4.93e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00275 K22399 - zju:107406500 735.332