Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00271 ATGCCGCAGGATTCGTCCGGACAAGACGTAGACGATTCGGAAGCTCAGTTCGCCGAGATTGATCCCACCGGTCGATATGGTCGGTACAAAGAGGTTTTAGGGAAGGGAGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCCTGGAATCAGGTTAAGGTGGCAGATCTATTGCGCAAATCAGAAGATTTGGAGCGCCTATATTCAGAAGTTCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGCATGAGAACATAAACTTCATTACTGAAATTTTCACGTCAGGGACATTACGCCAGTACCGGAAGAAGCACAAGAATGTTGATTTGAGAGCACTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTCCTATCTTCATAGTCATGACCCACCTGTTATTCATCGAGATCTGAAGTGTGATAACATTTTTGTCAATGGGAATCAAGGTGAGGTGAAAATTGGTGACTTAGGATTGGCAGCTATTCTTCAACAGGCCCATGCAGCTCACAGTGTCATAGGAACTCCAGAGTTTATGGCACCGGAACTCTATGAAGAGGAATATAACGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTAGAGTTGGTAACCTTCGAGTACCCATATGTTGAATGTGCCAATGCTGCTCAGATATACAAGAAAGTGACATCTGGAATAAAGCCAGCGTCATTGTCAAAAGTGGCAGACCCTGGAGTTAAAGCATTTATTGAGAAGTGTATTGCGAATGCTTCTGAACGATTGCCTGCAAAGGATCTCTTAATGGATCCCTTTCTTCACTCAGATTATGAGAGTGGTAGTTTTGGTCGTTCTTTATGGTCTTCTAATTTCCTAATGCTTGATCTTATTTTACCATCTGATGTATCAATTACAGGACGTGGTGGCCATCATGCCATTGGTAAAAGTGCTGAGGATAATTTGGTTGAGACAAGCAGGGAATTCACAGTGGAAGGTCAAAGGAGAGATGCTAATACCATATTTCTGAAACTGCGAATAGCGGACTCGTTAGGTCATATACGCAATATCCACTTTCCCTTTGATATAGAGGAAGATACTGTAATTGCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACTGACCAAGATGTTACGACTATTGCTGAGATTATTGATTCAGAAATTCGATATCATATTCCAGATTGGAATCCCAGTGACCATCAGGTTGATGGTTTTTGTCAAGAGTTAGCTGTTTCAGGTAGCTGTTCCTCTGAAACTAAGGTTGAGGCATCTCCTGTGGGACTTGAGTCTCCCTCTTCTCTTGCTAATCTTGCGCTAGAAAGATTACCTTCAGGTCGTAAGTATTGGTCTGACTCACCCAAGGCAGGTGGAAACTCTCCATCAAGGCTAGGTGCTTCAAACTTGTATTCTCAAGTGGACCTGAACACTGAGGGGTACGACTCCACTGCAAATGGTGCTACTTCATCTGAGCAGCCAGTTTGCAAGCACACCAGTGCAGGTGATTGTAGTTCGGAGGAAGAATCTGGTGGGCCTGCTGGTTCCAACTTCTGTGAGAGAAGTGTTACATCTGGGGGTTTACACGCACTCGACAGAGAATCTCCTTTGGGAGAAGAGTCTAGAAGATTGAAAGGCTCTGAATTAGAAGATATCAATGTAGTTTCTGAAAAACTGGCCAATCTGTTGGTAAGACAGAAGGAAGAGTTAGATGAACTTAAGAGGAAGCATAAGTTAGCTGTCTCAGATCTTCTGAACGAACTTACTCCAGAAATGCGTGAAGAAGTTTTAAATATGTGTAATCTCAAGTTACCTGAGTATGAAGACGTATAG 1887 0.4234 MPQDSSGQDVDDSEAQFAEIDPTGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRKSEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKHENINFITEIFTSGTLRQYRKKHKNVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAHAAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVTSGIKPASLSKVADPGVKAFIEKCIANASERLPAKDLLMDPFLHSDYESGSFGRSLWSSNFLMLDLILPSDVSITGRGGHHAIGKSAEDNLVETSREFTVEGQRRDANTIFLKLRIADSLGHIRNIHFPFDIEEDTVIAVASEMVEELELTDQDVTTIAEIIDSEIRYHIPDWNPSDHQVDGFCQELAVSGSCSSETKVEASPVGLESPSSLANLALERLPSGRKYWSDSPKAGGNSPSRLGASNLYSQVDLNTEGYDSTANGATSSEQPVCKHTSAGDCSSEEESGGPAGSNFCERSVTSGGLHALDRESPLGEESRRLKGSELEDINVVSEKLANLLVRQKEELDELKRKHKLAVSDLLNELTPEMREEVLNMCNLKLPEYEDV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00271 628 Gene3D Transferase(Phosphotransferase) domain 1 110 292 - -
Bach5g00271 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bach5g00271 628 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00271 628 Gene3D - 350 438 - -
Bach5g00271 628 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Bach5g00271 628 CDD STKc_WNK 25 285 - -
Bach5g00271 628 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00271 628 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Bach5g00271 628 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Bach5g00271 628 Coils Coil 574 605 - -
Bach5g00271 628 MobiDBLite consensus disorder prediction 499 518 - -
Bach5g00271 628 MobiDBLite consensus disorder prediction 499 538 - -
Bach5g00271 628 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 608 - -
Bach5g00271 628 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00271 628 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 354 408 IPR024678 GO:0004674|GO:0005524
Bach5g00271 628 Gene3D Phosphorylase Kinase; domain 1 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00271 Bach-Chr5 1886758 1890024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00271 17 433 MAP Kinase Kinase Kinase AT3G22420 52.026 6.77e-162 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bach5g00271 Pkinase 1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00271 K08867 - qsa:O6P43_030822 822.387