Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00239 ATGGAGCCCTCTGAATCTGAAGCCACTGTCATTTCGAATTCCAGCAAAGATCAAGAATTGGGTTTTCAGCCGGCACCTTCTTCCCCCAGTCCCGATCACGATCGTAAGACGTCAGATCTCAATCACCAGGCTGAGGCCGATGCACTTCATGGGGAGCTTCACAAGAAGTTGGATTTGAAGGATAAGGAGGAGGAACCCGAGACCGAGAACAAAGATTCAGAATTTGATGATAGTCAGCAAGTAAGTATTCATCAGGGTGCTGAAGAATCTGGTAATGGAGAGGGATGGAATGAAGATAACAGCAATTGGAATGCAAATGAGAGCAATAATTGGAATGAGAATGTGAACGAGACTGAGAATGATTGGGTGGCTAGAGATGTCGATGTAACTGTCGGTGATGAAGAGGAGAAGAAGGACGAGAGAAGCGGCGGTAGAACTCACAAGTATCCGGTGAGGCCCGAAGCTGAAGATTGTGCATTCTATCTAAAGACTGGAACTTGCAAATTTGGATTCAATTGCAAGTTTAATCACCCTGTTAGGAGGAAAAATCTGGCTGTCAAGGAGAAAGCAGGGGAAAGAGAAGAATCAGCAGATGGGCTGGGACAGGCAGAATGCAAGTATTATCTAAGGTCAGGGGGTTGTAAGTTTGGAAAAGCTTGTAAATATAATCACACCAGGGGAAAGTGTTCTGCAGCCACAATTCTAGAGCTTAACTTTCTGGGCCTGCCTATTCGTCCGGGGGAGAAAGAGTGCCCCTATTACATGCGTAATGGCTCTTGCAAGTTTGGAGCTAACTGTAAGTTTAATCATCCTGATCCTACAGCTGTTGGAGGGGGTGATCCTCCTTCAGGATATGGTAATGGCAGGAACGTTTCATTACATGGTGCATCACAACCGTCTGTACCCTCCTGGTCTTCTCCAAGAACAGTAAATGAAGCGGCTCCTTTTGTGCCAATGATGCTTTCACCTACTCAAGGGGTTTCTACCCAGAGTTCTGAATGGAATGGATATCAGGCACCTGTCTACCTGCCTGAGAGGAGTATGCATCCACCTTCTACATATGTCATGAACAACCCGGCCATCGAGACAAATGTTTATATTCATCATCAAAAACAGTTGCAAGTTGAAGAGTTTCCAGAAAGGCCTGGTGAACCTGAATGCACGTACTTCTTGAAAACTGGGGATTGCAAGTTTAAATCTAATTGTAAATTTCACCATCCAAAGAATCGGGTTGCAAGACCACCTCCATGTACCCTCAGTGACAAGGGTCTTCCTTTGAGACCTGACCAGAATATCTGTTCACATTACGGTCGTTATGGAATTTGCAAATTTGGACCTGCTTGTAAGTTTGACCATCCAATAAACCCAACACCCTCGACTATGTCTGGACATGATCAGCAATCCTCCTTCCCCCCCAACTCTGCTAACGTAGAAGTGGGTGGGGTGGCTGGAAGTGGCGGTGCAAGTGATGTGGTATTTCAGCAAACTGTGTAAACCTTTTTTGTCAAGGTTCTTCTAGTTTTAAGAATGAAAATTACCCAGAATTTGTAATTTTCTTCTTAGACGTGATAAATTTATTAACTTGTCGGTTCTGCACAAAGCGGCAAGCTTTGCAGAGAATAGCAATTTATGTCAGACATGTTTTATTACGCATAACATTAGCATTGTAAATT 1673 0.4417 MEPSESEATVISNSSKDQELGFQPAPSSPSPDHDRKTSDLNHQAEADALHGELHKKLDLKDKEEEPETENKDSEFDDSQQVSIHQGAEESGNGEGWNEDNSNWNANESNNWNENVNETENDWVARDVDVTVGDEEEKKDERSGGRTHKYPVRPEAEDCAFYLKTGTCKFGFNCKFNHPVRRKNLAVKEKAGEREESADGLGQAECKYYLRSGGCKFGKACKYNHTRGKCSAATILELNFLGLPIRPGEKECPYYMRNGSCKFGANCKFNHPDPTAVGGGDPPSGYGNGRNVSLHGASQPSVPSWSSPRTVNEAAPFVPMMLSPTQGVSTQSSEWNGYQAPVYLPERSMHPPSTYVMNNPAIETNVYIHHQKQLQVEEFPERPGEPECTYFLKTGDCKFKSNCKFHHPKNRVARPPPCTLSDKGLPLRPDQNICSHYGRYGICKFGPACKFDHPINPTPSTMSGHDQQSSFPPNSANVEVGGVAGSGGASDVVFQQTV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00239 497 MobiDBLite consensus disorder prediction 94 118 - -
Bach5g00239 497 SUPERFAMILY CCCH zinc finger 152 180 IPR036855 GO:0046872
Bach5g00239 497 MobiDBLite consensus disorder prediction 1 148 - -
Bach5g00239 497 ProSiteProfiles Zinc finger C3H1-type profile. 152 180 IPR000571 GO:0046872
Bach5g00239 497 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 383 408 IPR000571 GO:0046872
Bach5g00239 497 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 156 178 IPR000571 GO:0046872
Bach5g00239 497 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 430 453 IPR000571 GO:0046872
Bach5g00239 497 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 202 224 IPR000571 GO:0046872
Bach5g00239 497 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 247 271 IPR000571 GO:0046872
Bach5g00239 497 ProSiteProfiles Zinc finger C3H1-type profile. 381 409 IPR000571 GO:0046872
Bach5g00239 497 SMART c3hfinal6 245 272 IPR000571 GO:0046872
Bach5g00239 497 SMART c3hfinal6 381 408 IPR000571 GO:0046872
Bach5g00239 497 SMART c3hfinal6 199 226 IPR000571 GO:0046872
Bach5g00239 497 SMART c3hfinal6 427 454 IPR000571 GO:0046872
Bach5g00239 497 SMART c3hfinal6 152 179 IPR000571 GO:0046872
Bach5g00239 497 MobiDBLite consensus disorder prediction 119 148 - -
Bach5g00239 497 Gene3D - 189 276 - -
Bach5g00239 497 Gene3D - 370 453 - -
Bach5g00239 497 SUPERFAMILY CCCH zinc finger 386 410 IPR036855 GO:0046872
Bach5g00239 497 SUPERFAMILY CCCH zinc finger 247 272 IPR036855 GO:0046872
Bach5g00239 497 PANTHER PROTEIN PHOSPHATASE RELATED 50 463 - -
Bach5g00239 497 ProSiteProfiles Zinc finger C3H1-type profile. 199 227 IPR000571 GO:0046872
Bach5g00239 497 Gene3D - 111 188 - -
Bach5g00239 497 MobiDBLite consensus disorder prediction 275 308 - -
Bach5g00239 497 ProSiteProfiles Zinc finger C3H1-type profile. 427 455 IPR000571 GO:0046872
Bach5g00239 497 MobiDBLite consensus disorder prediction 290 308 - -
Bach5g00239 497 MobiDBLite consensus disorder prediction 1 25 - -
Bach5g00239 497 SUPERFAMILY CCCH zinc finger 204 228 IPR036855 GO:0046872
Bach5g00239 497 ProSiteProfiles Zinc finger C3H1-type profile. 245 273 IPR000571 GO:0046872
Bach5g00239 497 MobiDBLite consensus disorder prediction 32 78 - -
Bach5g00239 497 SUPERFAMILY CCCH zinc finger 425 453 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00239 Bach-Chr5 1688918 1692783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00239 377 461 C2H2 Transcription Factor Family AT3G02830 50.588 2.92e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach5g00239 zf-CCCH 4.5e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00239 - - qsa:O6P43_030782 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach5g00239 5 1688918 1692783 Bach2g02220 2 28998526 29002800 BWGD
Bach5g00239 5 1688918 1692783 Bach2g02220 2 28998526 29002800 ECH
Bach5g00239 5 1688918 1692783 Bach5g00239 5 1688918 1692783 ECH