Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00221 CTCCAAGCTCGAGTAGTTTCTAACATCTAAACCCTTCCCACTTCCCCACCGCTAGGAATTGTAGGGTTTCATTCATCAAGTTCGAGTCCCTGAGACCTTCAAGTATATGTAACGATATTATATTTGGGGTGGTGTGTTTCTCTTCTATCCGTTTTCGTCTGCTTTTGTAGACTGAACCTTTTATAAAGAATGGCTGCTTTTAGTCATCTTTCATTGTGTCCGTACAGCCTATGTTGCCGCCCTAATCCCAGAAGGCGCTCTATTTTGTCCTCGGTTCGCTCTTCCGCGGTTATTGGCACTGATGGGTCAAAAGCACCCCGCAAAAGATCAACAAGAGTGGAAGGTCCTAAAAAAAGCTTGGAAGACTCTGTTCAACGCAGGATGGAACAATTTTATGAAGGCTCTGATGGACCACCCCTCCGAATTCTTCCTATTGGTGGTCTGGGTGAAATTGGGATGAATTGCATGCTTGTGGGGAACCATGACCGCTACATTCTCATTGATGCTGGTGTCATGTTTCCCGAGAATCCAAAGATTATACCTGATACTTCATTTATAAGAAAATGGAGGCACAAAATTGAAGCAGTTATTATAACACATGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCTGCATTGGATTCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTGTAAAAAAGCGTCTAAAAGAGCATGGCATTTTTTTATCATCAAGACTTAAAGTATTTAGAACAAGGAAGAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCAATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATCCTTCATACAGGGGATTGGAAGATTGATGAATCGCCATTAGATGGGAAAGTCTTTGACCGTGACGCTTTAGAGGAACTGTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCGGGAAGGACAACCAGTGAATCTGTTGTGGCAGATGCATTATTGAGGCGTATTTCTGCTGCTAAAGGAAGAATCATTACAACCCAGTTTGCATCAAATATACATCGTCTTGGTAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTGGGTATGTCTCTAAGGACATATCTAGATGCAGCTTGGAAGGATGGAAAAGCACCATTTGATCCATCTACTCTGGTGAAAGCAGAGGACATTGATGGTTATGCTCCAAAGGACCTGATAATTGTGACAACTGGTTCTCAAGCAGAACCGCGTGCTGCCTTGAATCTTGCATCATATGGAAGTAGTCATGCTTTCAAACTGACCAAGGAAGATGTAATTTTGTATTCAGCAAAGGTTATCCCTGGTAATGAGTCACGTGTGATGAAAATGCTAAACCGCATATCAGAGATTGGATCAACAATAATTATGGGGAAGAATGAAGGGTTACACACCTCTGGTCATGGGTATCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAGCCCCAACATTTCCTTCCCATACATGGAGAACTCTTGTTCCTGAAAGAACATGAATTACTTGGGAAATCAACCGGCATTCGACATACTGCTGTTATTAAAAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTGCTTTCTAATGGTTTCATCTCCCTTGGAAAAGAGAATTTGCAGTTGAAGTATAGTGATGGGGACAAGGCATTTGGTACATCAAGTGAACTCTTCATAGATGAAAGATTGAGAATTGCCTTAGATGGCATTATTGTGGTCAGCATGGAAATATTCCGCCCTCAAAAGTTAGACAGTCTGGTTGAAAGTACCATAAAAGGCAAGATAAGAATTACGACAAGATGCCTATGGCTTGACAAAGGGAAGCTGGTGGATGCACTTGATAAAGCTGCTCATGCTGTGCTTTCAAGCTGCCCTGTAAACAGTCCATTGTCTCACATTGAAAAAACTGTGTCTGAGGTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAACGACCTGAAGTTATTGCCACCGCCACAGAAAACCCTGCAGCTGTTCTTGCCGATGAAGTTAACACAAAGCTGTCTGGCAAATACATTGTTGGACCTGGGATATCATCATTGAGAAAATTAGTGGATGGACATATAAGGGAAAATCAGTCAAAGAAAATTCAAGTAAAAGGAGTGCCAGACGATGGCATTTATCCTGAAGGACTACTACCCGAGGAAGACGTCGCTACATCAAGTGGAGATGATGGATCTGTCAATAATTCAGAGGATTCGGGTGAATTTTGGAAATCACTCATTAAATCTAACAATGGTTGTGTTCCACATAGGGAACGGAGCTCCCAGCTGAAGGAAGATGGTTCTGAGGACACGGGAGAGAATAAATCTGAAAGCACGTCAACTTCTGAACCTAAGTCTTCAAAGCCCAGGAGAAACAAATGGAAACCCGAGGAAGTGAAGAAACTGATTGGCATGCGTGGAGATCTGCACGAAAGATTTCAAGCTGCGAAGGGAAGAATGGCCCTTTGGGAAGAGATTTCTAAGAACTTGTTGGCTGATGGGATCGAAAGAAGTCCAGGGCAGTGTAAATCATTGTGGACATCTTTGGTACAGAAATACGAGGAGATCAAGGTTGGAAAGAAAAGCCAGGAGATTTGGCCGTATCTTGAAGACATGGATAGGGTTCTGTCTGATAAAGAGGCACTGGCAACAAAATGATCTGAAATGTGGTAGACGGGTTCAGAAAATTTTATTAGAGCCTTCTGCTGTAAGATTGGGAACGTTATAAGTGTTTGGGGGCGTGTCGAGCAGGAAGACAAACCATCAGCTCTTTTATCGTTGCATAATAGACTCATGGTGTTGAAGGTCTAGTCTTGTGGAGGATAGTTATACATGAAAAGGGTTGGCTTTATACTCGATGGGCTCCATTAACTGCAGCTAATGAAGGGAGAATATCTGGGTTCAGGCATTGATTTTCCCTCTTCCCAAGACCCCCAAGAAAGACACCACCATATACCATGCCCCCCTTTATTTACCTTTGTTTAATATGTATCATAATTGAATTCATTATTTTGTTGGTGGGACGCGTGTGATGCCATAAGCAACTTTATTGTTAATTAATTGTTTTTCTACTACAA 3179 0.4206 MAAFSHLSLCPYSLCCRPNPRRRSILSSVRSSAVIGTDGSKAPRKRSTRVEGPKKSLEDSVQRRMEQFYEGSDGPPLRILPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPENPKIIPDTSFIRKWRHKIEAVIITHGHEDHIGALPWVIPALDSHTPIFASSFTMELVKKRLKEHGIFLSSRLKVFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDRDALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADALLRRISAAKGRIITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPFDPSTLVKAEDIDGYAPKDLIIVTTGSQAEPRAALNLASYGSSHAFKLTKEDVILYSAKVIPGNESRVMKMLNRISEIGSTIIMGKNEGLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEIFRPQKLDSLVESTIKGKIRITTRCLWLDKGKLVDALDKAAHAVLSSCPVNSPLSHIEKTVSEVLRKLVRKYSGKRPEVIATATENPAAVLADEVNTKLSGKYIVGPGISSLRKLVDGHIRENQSKKIQVKGVPDDGIYPEGLLPEEDVATSSGDDGSVNNSEDSGEFWKSLIKSNNGCVPHRERSSQLKEDGSEDTGENKSESTSTSEPKSSKPRRNKWKPEEVKKLIGMRGDLHERFQAAKGRMALWEEISKNLLADGIERSPGQCKSLWTSLVQKYEEIKVGKKSQEIWPYLEDMDRVLSDKEALATK 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00221 856 SMART Lactamase_B_5a 89 281 IPR001279 -
Bach5g00221 856 Gene3D - 765 826 - -
Bach5g00221 856 PANTHER RIBONUCLEASE J 1 856 - -
Bach5g00221 856 MobiDBLite consensus disorder prediction 42 59 - -
Bach5g00221 856 ProSiteProfiles Myb-like domain profile. 757 821 IPR001005 -
Bach5g00221 856 MobiDBLite consensus disorder prediction 35 59 - -
Bach5g00221 856 MobiDBLite consensus disorder prediction 671 710 - -
Bach5g00221 856 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 486 IPR036866 -
Bach5g00221 856 Gene3D - 81 488 IPR036866 -
Bach5g00221 856 MobiDBLite consensus disorder prediction 724 768 - -
Bach5g00221 856 Pfam Myb/SANT-like DNA-binding domain 762 845 IPR044822 -
Bach5g00221 856 MobiDBLite consensus disorder prediction 729 744 - -
Bach5g00221 856 Pfam Beta-lactamase superfamily domain 100 231 IPR001279 -
Bach5g00221 856 CDD GT1 763 828 - -
Bach5g00221 856 CDD RNaseJ_MBL-fold 80 486 - -
Bach5g00221 856 Gene3D - 273 423 IPR042173 -
Bach5g00221 856 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 429 466 IPR011108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00221 Bach-Chr5 1548247 1558132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00221 746 850 Trihelix Transcription Factor Family AT2G38250 30.841 8.74e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bach5g00221 Lactamase_B 3.8e-11 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00221 - - qsa:O6P43_022564 1360.13