Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00196 ATGGACTGGAATTTGAAAGCACCTTCTTGGGATTTGAGTGAATTAGAGCAAGCAACGTTGCCGAGCTTAGAAACAGTTGATGGGTCAAGTAGATTTGGAGTTCATACAAGCAACGTGGAATTTTCTGTAGATTTGAAGCTTGGACAGGTGGGGGATTCAGGAACTGATTCAGTGGCTAAGTGGAAAGAGCATGTTGGAGTCTCAAAAATGGCATCCTCCCCTTCTTCAGGTTCGTCCAAGAGAGCACGAGGAATTAACAACGGAACCCAGATGGTGTCATGCCTTGTCGATGGGTGCAATTCAGATCTTAGTAATTGTAGGGACTATCATAGGCGCCATAAGGTCTGCGAAATCCACTCCAAGACCCCAGAGGTCACAATTGGTGGCCACAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTCCATTCTCTAGAGGAATTTGATGAAGGAAAAAGAAGCTGCAGGAAGCGCTTAGATGGACATAACCGACGAAGAAGAAAGCCTCAGCCAGAGCCTCTCACGCGATCTGGTAGCTTTTTGTCCAATTACCAAGGTGCCCAGTTGTTGCCTTTCGCAAGTTCGCATGTATTTCCTTCCGCTGCGGTGTTGAACCCTAGTTGGAGTGGTGTTGTGACTTCGTGCACAGATGCAGTTAGGCTCCAAGGCCAAAGCCAACACCAACAAGTGCATTTGGTTAATGAACAAGAGCTGTTTCTTGGATCATCTCCCACGGCCAACAGCAGCTACAAAGAAGCGAAGCAACTGGCATTGTTACAAGGTGAGAATCTAAGAATGAACAACCAAAACCCACCTCTTGCAGCTGCTTCTTCTTTGTGTCAGACGCTATACCAGAGCAGGAGCAGCCCTTTGTCTGAAAGCAGTGGCAGTGGGGTCAGAAGCAAAATGTTGTGTGATAGTTTAACAAGTTCAGTCCACGACACTCATTGTGCTCTCTCTCTTCTGTCATCACCACAGACGCACACATCAGGGAGTGGTTTAAACCAAATGGTGCAGCCTCATTCGATCGCCCTCATGCAGCCCTTGGGACTCAGCCTGCATGATAACAGCTTAGACTCCGTCGACCAGGTTCTGGTTTCTAATGCCACTAACACCAGTGTTCATTGTCCACCAATGTATAACATGGGTTCTCAAGGATCCCAGGGGAATGAAAGCCCACACCCATTTCCCTTTCATTGGGAATAG 1203 0.4763 MDWNLKAPSWDLSELEQATLPSLETVDGSSRFGVHTSNVEFSVDLKLGQVGDSGTDSVAKWKEHVGVSKMASSPSSGSSKRARGINNGTQMVSCLVDGCNSDLSNCRDYHRRHKVCEIHSKTPEVTIGGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPLTRSGSFLSNYQGAQLLPFASSHVFPSAAVLNPSWSGVVTSCTDAVRLQGQSQHQQVHLVNEQELFLGSSPTANSSYKEAKQLALLQGENLRMNNQNPPLAAASSLCQTLYQSRSSPLSESSGSGVRSKMLCDSLTSSVHDTHCALSLLSSPQTHTSGSGLNQMVQPHSIALMQPLGLSLHDNSLDSVDQVLVSNATNTSVHCPPMYNMGSQGSQGNESPHPFPFHWE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00196 400 Gene3D - 84 155 IPR036893 GO:0003677|GO:0005634
Bach5g00196 400 MobiDBLite consensus disorder prediction 158 177 - -
Bach5g00196 400 SUPERFAMILY SBT domain 92 173 IPR036893 GO:0003677|GO:0005634
Bach5g00196 400 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 45 386 IPR044817 GO:0003677
Bach5g00196 400 Pfam SBP domain 94 167 IPR004333 GO:0003677
Bach5g00196 400 ProSiteProfiles Zinc finger SBP-type profile. 91 168 IPR004333 GO:0003677
Bach5g00196 400 FunFam Squamosa promoter-binding-like protein 14 85 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00196 Bach-Chr5 1386252 1388754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00196 1 400 SBP-box Gene Family AT5G50670 43.357 2.76e-83 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bach5g00196 SBP 1.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00196 - - qsa:O6P43_023553 499.59