Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00180 ATGGACAAGTTCAATTTTGTTAGAAATGGAGTGACAAGATTGCCTCCTGGTTTTCGTTTCCAGCCAACAGACGAAGAGCTTCTCTTTCAATACCTCATACGTAAGGTCTTTTCGTGCCCACTTCCTGCTTCAATCATCCCCGAGATCAATGTCTGCAAGTACGATCCTTGGGATTTGCCAGGTGGTTGGGATGAGCAAGAGAGATACTTTTTCAGCTACAAGGAGGCAAAATATCGAAATGGTAACCGCATGAACAGAACAACCAAATCTGGCTATTGGAAAGCAACAGGGTCAGACAAAAAGATTTCATCTTCAAGGACAAAGGACGTCGGAGGGATAAGAAAATCCCTGGTTTTTAACCGAGGGAAAGCCCAAAATGGCTCCAGAACTGACTGGAGCATGCATGAATATCGCCTTGTCAGAGCAGAAAACCAGAATTACATAAACGAGATAGGCGATTGGGTTCTGTGCCGCATATTCTTGAAGAAAATAAATCCAGGAAATGATGATATACAGACTCAAAAGCAAAACCATGTTGAGGTGGCTCAACCGAGATTCTTTGATTTTATGATGGTACACAAGACAATTCCTTGTTCCATCCGTTCTCCTACATCGTCATCTTGTTCAAGTTCCAGTAGTTTTACGGAGGTGTCTTCAAATGTATCAGAGTACGAAGAAACAAGTGGCCATACTGAATTTTAA 702 0.4217 MDKFNFVRNGVTRLPPGFRFQPTDEELLFQYLIRKVFSCPLPASIIPEINVCKYDPWDLPGGWDEQERYFFSYKEAKYRNGNRMNRTTKSGYWKATGSDKKISSSRTKDVGGIRKSLVFNRGKAQNGSRTDWSMHEYRLVRAENQNYINEIGDWVLCRIFLKKINPGNDDIQTQKQNHVEVAQPRFFDFMMVHKTIPCSIRSPTSSSCSSSSSFTEVSSNVSEYEETSGHTEF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00180 233 Gene3D NAC domain 23 165 IPR036093 GO:0003677|GO:0006355
Bach5g00180 233 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 205 - -
Bach5g00180 233 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Bach5g00180 233 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Bach5g00180 233 SUPERFAMILY NAC domain 9 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00180 Bach-Chr5 1272631 1273727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00180 1 195 NAC Transcription Factor Family AT5G13180 52.535 6.67e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach5g00180 NAM 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00180 - - aprc:113868555 298.516