Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00178 ATGGGTTGCGTGCTCGGAACGCCCGCGGATGCCAGAGGCCGCCGGACGGATTCCGGAGCTCAGCACCGTCGTCGCAGTAGCCAACAAGACTCTGTTACCGCTGGAGACAATGCCTCCAGGGTTAGGAAGGAGGGGACGGTGAGGGAGAGGCAAAGGACTCAGCACACCGGCGATTTTCCCGGGTCTTTCCCGGTACCGGAGCGCAGGAAACCTAGGCTTGATCCATGCGCTAAAACCCCACAGGGTTGGCCGTCTTGGTTGATGGCCGTGGCTGGCGATGCGATCGGAGATTGGACTCCTCGTCGTGCCAGCACGTTCGAGAAGCTTGCTAAGATTGGGCAAGGTACTTATAGCAATGTATATAAAGCGAAAGACCTTCTCACTGGAAAGACAGTGGCCTTAAAGAAAGTCAGATTTGATAATTTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCCAATGTCGTTAAACTTGAAGGCTTGGTTACTTCAAGAATGTCATGTAGTCTTTACTTGGTATTCGAGTATATGGAACACGATCTAGCCGGGCTTGCTGCTGGCCAGGGTGTTAAGTTCACCGAACCTCAGGTCAAATGCTATATGAAGCAATTTCTCTCTGGCCTTGAGCACTGCCATAGCCGTGGTGTCTTGCACCGTGATATCAAGGGTTCCAATCTCCTTATTGACAATGAAGGAATCCTTAAAATAGCAGATTTTGGACTGGCGACTTTTTTCGACCCTGAGCAAAAGCAGCCTATGACAAGCAGAGTTGTTACCCTTTGGTACCGGCCCCCTGAGCTTCTTCTTGGGGCTACATTCTATGGTGTTGGCATTGACCTATGGAGTGCTGGATGCATTTTGGCTGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTTAAGCTATGTGGCTCTCCAACTGAGGAATATTGGAAGAAATATAGATTGCCCAATGCGACACTTTTTAAGCCACAGCAACCTTACAAGCGTAGCATATCAGAAAACTTTAAGGATTTCCCTCCTTCTTCTTTACCTCTAGTTGAATCTCTTCTTGCAATAGATCCTGATAACCGTGGCACTGCCTTGGCTGCTCTAAATAGTGAATTCTTTACCACTGAGCCCTATGCTTGTGAACCATCAAGCTTACCGAAATATCCCCCCAGCAAGGAACTGGATGTGAAACTGAAAGATAAAGAAGCGAGAAGGCAAAAAGTTCTAAGTGGGAAAGCTAACGCAGTTGATGGTGCAAGGAGAGTAAGAGCACGTGAGCGGGGTCGGGCCATTCCAGCCCCAGAAGCTAATGCAGAGATTCAAACAAACCTAGATAGGTGGAGAGTTGTGACCCATGCAAATGCAAAAAGCAAGAGCGAGAAATTCCCACCTCCTCATCAGGATGGAGCTGTTGGATATCCACTGGATGCATCGCACAAGGCACCTGTTTCATTTGGTGCCAGTGATGCTGCTTCCTTTGGCTCAGCAATGTTTATTTCAAAGACTTCAGGATCTGGTAAGAGTCAAGCTGCTGCAGGAGCTCATAGAGGAAAGAAAACTAATAAAGCAGAGTCTTAG 1629 0.4856 MGCVLGTPADARGRRTDSGAQHRRRSSQQDSVTAGDNASRVRKEGTVRERQRTQHTGDFPGSFPVPERRKPRLDPCAKTPQGWPSWLMAVAGDAIGDWTPRRASTFEKLAKIGQGTYSNVYKAKDLLTGKTVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQFLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFFDPEQKQPMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTEEYWKKYRLPNATLFKPQQPYKRSISENFKDFPPSSLPLVESLLAIDPDNRGTALAALNSEFFTTEPYACEPSSLPKYPPSKELDVKLKDKEARRQKVLSGKANAVDGARRVRARERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASHKAPVSFGASDAASFGSAMFISKTSGSGKSQAAAGAHRGKKTNKAES 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00178 542 MobiDBLite consensus disorder prediction 1 78 - -
Bach5g00178 542 FunFam probable serine/threonine-protein kinase At1g54610 93 188 - -
Bach5g00178 542 CDD STKc_CDK9_like 106 390 - -
Bach5g00178 542 FunFam probable serine/threonine-protein kinase At1g54610 189 430 - -
Bach5g00178 542 MobiDBLite consensus disorder prediction 516 542 - -
Bach5g00178 542 MobiDBLite consensus disorder prediction 41 55 - -
Bach5g00178 542 Gene3D Phosphorylase Kinase; domain 1 93 188 - -
Bach5g00178 542 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Bach5g00178 542 Gene3D Transferase(Phosphotransferase) domain 1 189 430 - -
Bach5g00178 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Bach5g00178 542 MobiDBLite consensus disorder prediction 472 492 - -
Bach5g00178 542 Pfam Protein kinase domain 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00178 542 SUPERFAMILY Protein kinase-like (PK-like) 101 395 IPR011009 -
Bach5g00178 542 PANTHER CELL DIVISION PROTEIN KINASE 104 394 - -
Bach5g00178 542 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach5g00178 542 SMART serkin_6 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00178 Bach-Chr5 1257207 1261110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00178 98 424 Core Cell Cycle Gene Families AT5G10270 51.603 4.90e-116 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bach5g00178 Pkinase 4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00178 K08819 - gmx:100807756 883.248