Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00171 ATGGCTTCGTCTGAGGATTCTCGCAGGTCACTTGTCCCTAGATATCTTTACTCTTCTTCATCATCATCACACAGACTATTCAATTTCAATACGCTGTTGATGAAGACCAATCAAAATCATGGAAGAGTGCCACTATCAAATTATTCATCACCACAAGCTCTATCTGCAGCAGGAGGAGGGAGGCTTATGATCCCTGCACCTAGCGAGAAGATCCAAATGTTTTCTCCGGCTTACTATGCTGCATGTACTGCCGGTGGAATCTGCAGCTGTGGCCTAACCCACATGACCGTCACTCCTCTGGATCTCGTCAAGTGCAACATGCAGATTGACCCGGCAAAGTATAAGAGCATCGCATCAGGATTTGGAGTTTTACTGAAGGAGCAGGGTGTTAAAGGTTTCTTCAGGGGCTGGGTGCCGACCCTACTGGGCTACAGTGCTCAGGGAGCGTGCAAATTTGGATTTTACGAGTTCTTCAAGAAGTATTACTCAGACATTGCCGGGCCCGAGTATGCAGCCAAGTACAAGACCTTGATATATCTTGCGGGCTCAGCCTCGGCAGAGGTCATTGCTGATGTTGCCCTTTGTCCCATGGAGGCAGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTAGAGGCTTGGCAGATGGATTCCCCAAGTTTGTTAAGGCTGAGGGTGCTCTTGGCTTGTACAAAGGACTTGTTCCTCTTTGGGGACGTCAGATTCCATATACAATGATGAAATTTGCCTCTTTTGAGACTATTGTGGAGATGTTGTACAAACACGCCATCCCAACCCCCAAAGAACAGTGCAGTAAAAGCCTGCAGCTCGGAGTCAGTTTTGCCGGTGGATATGTGGCAGGTGTACTCTGTGCCGTGGTCTCACACCCCGCCGACAACCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGACGCTGTGAAAAAGCTGGGGCTATGGGGTCTGTTTACTCGTGGCCTACCTCTTCGCATAGTTATGATTGGAACACTTACTGGAGCCCAGTGGGGAATCTATGATGCGTTTAAAGTATTTGTAGGGCTGCCTACTACTGGTGGAGCTGCTCCTCCACCCGCTGCAGCAAAGGCATGA 1119 0.4906 MASSEDSRRSLVPRYLYSSSSSSHRLFNFNTLLMKTNQNHGRVPLSNYSSPQALSAAGGGRLMIPAPSEKIQMFSPAYYAACTAGGICSCGLTHMTVTPLDLVKCNMQIDPAKYKSIASGFGVLLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLADGFPKFVKAEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKHAIPTPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAAPPPAAAKA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00171 372 FunFam Phosphate carrier protein, mitochondrial 77 355 - -
Bach5g00171 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 258 IPR018108 -
Bach5g00171 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 275 354 IPR018108 -
Bach5g00171 372 Gene3D Mitochondrial carrier domain 171 356 IPR023395 -
Bach5g00171 372 Gene3D Mitochondrial carrier domain 61 170 IPR023395 -
Bach5g00171 372 Pfam Mitochondrial carrier protein 80 163 IPR018108 -
Bach5g00171 372 Pfam Mitochondrial carrier protein 178 262 IPR018108 -
Bach5g00171 372 SUPERFAMILY Mitochondrial carrier 78 350 IPR023395 -
Bach5g00171 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 66 365 IPR044677 GO:0005315|GO:1990547
Bach5g00171 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 161 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00171 Bach-Chr5 1214255 1216265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00171 5 370 Chloroplast and Mitochondria Gene Families AT5G14040 76.694 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00171 K15102 - twl:119984136 573.548