Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach5g00165 ATGATGTCTAGAGTAAACGGAGTTACTTGGATTGATGACAACACTGCTTCTGCTTCTTGGGCTAGAAGCGCCAAGGCCAACACCAACAGCTCCAGAGAGAAAAACAATTCTGGTTTCATAGAGAACAAGGACGAAATGGGTTCTCTGTGTACATTTAAACCCGTGCTTGAGGTTGATGAGGAATGGTATATAGCGAATAAAAGTATCCAAAATTACCCAGATATGAGAGATATCACTTTCTCGCCCAACTTAGCCAACCCAGAAAGTCTATTGATGCACCCAGTGGATTCGACCTCTTATTGCTCTGCGTTCAGCAACATCGACCCATCTCATGTCCAGTACTTTCTGCCTCCAAAATCCACCTTGTCTTCTCTTCTCAACGTTGTCCCAAGCAACCTTTTAGGGCATGGCTTTGATATGGGTTGCGATGTCGGGTTGCTTGACCCTCAAGCTTCAAGTTCATCAGCAGCGCTCAATAGAGGGGATGGCTTTCTTGGAGGCTTCACCGATTTGAGCACAAATAACCAGATTAGCCTCCCTAATTTGTGCTTAGATCACCAAATATCAACAATGCGTATTCTCCAATTGCCCGAAAGCGGTGCCAGGTTTGCTGGTTTTCGGAGTTTTGAGGAGGTTCCTGAAAAGGCGTCGTTTCTAAATAGGCCCCATATTTTGAGACCCCTTGAATCGTCACCTCCATTGGGAGCACAGCCCACTCTTTTTCAGAAGAGAAGAACACTTCGGAAAAATTTGACTGATAGCAGGGGAAATGTGGGAGTTTTAGGTTCGGAAGATGGTGCGGTACCAAACAGAATTGAGAGAGATAGGAGCAAGTATGAATTTGGAGAAGGGGAAGATAGAAAAAAGAAGATGAATAATGGGGAGGAATTGGAAGATGGCAGTTTTGATAGGTCAGGGTTGAATTATGATTCGGATAACCTGACTGAGACTGATAAGACAGAAGAGAATGGAAAGAAAGGTGGAAACAGCTCACATGACAACGGTAGGGTCACGGGCGGTGACGGAGGGGACCAGAAAGGAAAGAAGAAGGGAATGCCTGCAAAGAATTTGATGGCCGAACGCCGGCGGCGGAAGAAGCTCAATGATCGATTATATATGTTGAGGTCCGTTGTTCCAAAGATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGACGCAGTTGAGTATTTGAAGGAACTACTGCAGAGGATCAATGACCTTCATAACGAATTGGAGTCATCACCTGCTGGCTCCTCTATCACGCCCGTCTCAAGCTTCCATCCATTGACACCTACCCCATCTTCACTATCCAGCCGCATAAAGGAAGAACTCTGCCCCACCTCAATGCCAAGCCCTAATGACCAACCTGCAAGGGTTGAGGTCGGATTGCGAGAAGGAAGAGGTGTAAATATCCACATGTTTTGTGGGCGCAGACCTGGTCTCCTGCTCTCTACCATGAGGGCTTTGGATAACCTTGGGTTAGACATCCAGCAAGCTGTTATTAGCTGTTTCAATGGATTTGCTATGGATATTTTTCGAGCTGAGCAATGCAAGGAAGGTCAGGATGTCCACCCTGATCAAATCAAAGCTTTGCTCTTGGATTCAGCTGGCTTCCATAGCAATAGCATGATCTAA 1635 0.4606 MMSRVNGVTWIDDNTASASWARSAKANTNSSREKNNSGFIENKDEMGSLCTFKPVLEVDEEWYIANKSIQNYPDMRDITFSPNLANPESLLMHPVDSTSYCSAFSNIDPSHVQYFLPPKSTLSSLLNVVPSNLLGHGFDMGCDVGLLDPQASSSSAALNRGDGFLGGFTDLSTNNQISLPNLCLDHQISTMRILQLPESGARFAGFRSFEEVPEKASFLNRPHILRPLESSPPLGAQPTLFQKRRTLRKNLTDSRGNVGVLGSEDGAVPNRIERDRSKYEFGEGEDRKKKMNNGEELEDGSFDRSGLNYDSDNLTETDKTEENGKKGGNSSHDNGRVTGGDGGDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAVEYLKELLQRINDLHNELESSPAGSSITPVSSFHPLTPTPSSLSSRIKEELCPTSMPSPNDQPARVEVGLREGRGVNIHMFCGRRPGLLLSTMRALDNLGLDIQQAVISCFNGFAMDIFRAEQCKEGQDVHPDQIKALLLDSAGFHSNSMI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach5g00165 544 MobiDBLite consensus disorder prediction 268 305 - -
Bach5g00165 544 FunFam BHLH transcription factor 347 415 - -
Bach5g00165 544 SMART finulus 357 406 IPR011598 GO:0046983
Bach5g00165 544 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 246 539 - -
Bach5g00165 544 Pfam Helix-loop-helix DNA-binding domain 358 400 IPR011598 GO:0046983
Bach5g00165 544 MobiDBLite consensus disorder prediction 413 437 - -
Bach5g00165 544 Gene3D - 345 414 IPR036638 GO:0046983
Bach5g00165 544 MobiDBLite consensus disorder prediction 314 329 - -
Bach5g00165 544 CDD bHLH_AtAMS_like 354 419 - -
Bach5g00165 544 MobiDBLite consensus disorder prediction 251 355 - -
Bach5g00165 544 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 417 IPR036638 GO:0046983
Bach5g00165 544 CDD ACT_UUR-ACR-like 471 531 - -
Bach5g00165 544 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 400 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach5g00165 Bach-Chr5 1178268 1180339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach5g00165 52 515 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 48.041 1.33e-114 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach5g00165 HLH 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach5g00165 - - qsa:O6P43_023513 720.309